Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
GABREP78334 AL139393.2-201ENST00000608721 2025 ntBASIC23.37■■□□□ 1.33
GABREP78334 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
GABREP78334 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC23.37■■□□□ 1.33
GABREP78334 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
GABREP78334 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC23.37■■□□□ 1.33
GABREP78334 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
GABREP78334 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
GABREP78334 AC019171.1-201ENST00000601251 1056 ntBASIC23.36■■□□□ 1.33
GABREP78334 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC23.36■■□□□ 1.33
GABREP78334 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC23.36■■□□□ 1.33
GABREP78334 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
GABREP78334 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC23.36■■□□□ 1.33
GABREP78334 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
GABREP78334 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
GABREP78334 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
GABREP78334 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC23.36■■□□□ 1.33
GABREP78334 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
GABREP78334 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC23.35■■□□□ 1.33
GABREP78334 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
GABREP78334 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
GABREP78334 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC23.35■■□□□ 1.33
GABREP78334 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC23.35■■□□□ 1.33
GABREP78334 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
GABREP78334 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC23.35■■□□□ 1.33
GABREP78334 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
GABREP78334 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
GABREP78334 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC23.34■■□□□ 1.33
GABREP78334 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
GABREP78334 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC23.34■■□□□ 1.33
GABREP78334 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
GABREP78334 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.33
GABREP78334 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.33
GABREP78334 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
GABREP78334 AC087393.1-201ENST00000582896 145 ntBASIC23.33■■□□□ 1.33
GABREP78334 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC23.33■■□□□ 1.33
GABREP78334 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
GABREP78334 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
GABREP78334 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC23.33■■□□□ 1.32
GABREP78334 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC23.32■■□□□ 1.32
GABREP78334 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
GABREP78334 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
GABREP78334 TK2-216ENST00000564917 1156 ntTSL 3 BASIC23.32■■□□□ 1.32
GABREP78334 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC23.32■■□□□ 1.32
GABREP78334 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC23.32■■□□□ 1.32
GABREP78334 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
GABREP78334 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
GABREP78334 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC23.31■■□□□ 1.32
GABREP78334 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
GABREP78334 Z92544.1-202ENST00000571933 1220 ntBASIC23.31■■□□□ 1.32
GABREP78334 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
GABREP78334 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
GABREP78334 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
GABREP78334 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC23.3■■□□□ 1.32
GABREP78334 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
GABREP78334 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC23.3■■□□□ 1.32
GABREP78334 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC23.3■■□□□ 1.32
GABREP78334 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
GABREP78334 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
GABREP78334 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC23.29■■□□□ 1.32
GABREP78334 AC008406.3-201ENST00000620001 1374 ntBASIC23.29■■□□□ 1.32
GABREP78334 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
GABREP78334 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
GABREP78334 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
GABREP78334 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
GABREP78334 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
GABREP78334 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
GABREP78334 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC23.28■■□□□ 1.32
GABREP78334 GRAMD4P7-201ENST00000578182 1232 ntBASIC23.28■■□□□ 1.32
GABREP78334 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
GABREP78334 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
GABREP78334 WHAMMP3-201ENST00000611636 1609 ntBASIC23.27■■□□□ 1.32
GABREP78334 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
GABREP78334 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
GABREP78334 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
GABREP78334 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC23.27■■□□□ 1.32
GABREP78334 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
GABREP78334 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC23.26■■□□□ 1.31
GABREP78334 RPS2P7-201ENST00000447334 885 ntBASIC23.26■■□□□ 1.31
GABREP78334 CREM-229ENST00000474362 1030 ntTSL 2 BASIC23.26■■□□□ 1.31
GABREP78334 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC23.26■■□□□ 1.31
GABREP78334 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC23.26■■□□□ 1.31
GABREP78334 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
GABREP78334 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
GABREP78334 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
GABREP78334 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC23.25■■□□□ 1.31
GABREP78334 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
GABREP78334 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
GABREP78334 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
GABREP78334 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
GABREP78334 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
GABREP78334 MIR935-201ENST00000401179 91 ntBASIC23.24■■□□□ 1.31
GABREP78334 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC23.24■■□□□ 1.31
GABREP78334 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC23.24■■□□□ 1.31
GABREP78334 LONRF2P2-201ENST00000439212 571 ntBASIC23.23■■□□□ 1.31
GABREP78334 KRT125P-201ENST00000546827 989 ntBASIC23.23■■□□□ 1.31
GABREP78334 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
GABREP78334 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
GABREP78334 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC23.23■■□□□ 1.31
GABREP78334 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms