Protein–RNA interactions for Protein: P56703

WNT3, Proto-oncogene Wnt-3, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3P56703 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC23.12■■□□□ 1.29
WNT3P56703 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC23.12■■□□□ 1.29
WNT3P56703 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC23.11■■□□□ 1.29
WNT3P56703 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
WNT3P56703 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
WNT3P56703 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC23.11■■□□□ 1.29
WNT3P56703 AC010501.1-201ENST00000606270 1962 ntBASIC23.1■■□□□ 1.29
WNT3P56703 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
WNT3P56703 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC23.1■■□□□ 1.29
WNT3P56703 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC23.1■■□□□ 1.29
WNT3P56703 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
WNT3P56703 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
WNT3P56703 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
WNT3P56703 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
WNT3P56703 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
WNT3P56703 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
WNT3P56703 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
WNT3P56703 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
WNT3P56703 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
WNT3P56703 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC23.08■■□□□ 1.29
WNT3P56703 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC23.08■■□□□ 1.29
WNT3P56703 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC23.08■■□□□ 1.29
WNT3P56703 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC23.07■■□□□ 1.28
WNT3P56703 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
WNT3P56703 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
WNT3P56703 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC23.07■■□□□ 1.28
WNT3P56703 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
WNT3P56703 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
WNT3P56703 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
WNT3P56703 MED25-210ENST00000612854 801 ntTSL 5 BASIC23.06■■□□□ 1.28
WNT3P56703 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
WNT3P56703 MED25-214ENST00000622402 642 ntTSL 5 BASIC23.06■■□□□ 1.28
WNT3P56703 AL359258.2-201ENST00000564063 1566 ntBASIC23.06■■□□□ 1.28
WNT3P56703 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC23.05■■□□□ 1.28
WNT3P56703 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
WNT3P56703 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
WNT3P56703 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
WNT3P56703 CEBPA-AS1-201ENST00000592982 2198 ntBASIC23.04■■□□□ 1.28
WNT3P56703 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
WNT3P56703 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
WNT3P56703 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
WNT3P56703 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
WNT3P56703 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
WNT3P56703 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
WNT3P56703 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
WNT3P56703 AL359504.2-201ENST00000605506 1601 ntBASIC23.02■■□□□ 1.28
WNT3P56703 HSD17B1P1-201ENST00000590052 955 ntBASIC23.02■■□□□ 1.28
WNT3P56703 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
WNT3P56703 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC23.02■■□□□ 1.28
WNT3P56703 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC23.02■■□□□ 1.28
WNT3P56703 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
WNT3P56703 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
WNT3P56703 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC23.01■■□□□ 1.27
WNT3P56703 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC23.01■■□□□ 1.27
WNT3P56703 ABHD17AP3-201ENST00000503096 1137 ntBASIC23.01■■□□□ 1.27
WNT3P56703 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
WNT3P56703 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
WNT3P56703 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
WNT3P56703 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC23■■□□□ 1.27
WNT3P56703 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC23■■□□□ 1.27
WNT3P56703 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
WNT3P56703 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
WNT3P56703 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC22.99■■□□□ 1.27
WNT3P56703 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC22.99■■□□□ 1.27
WNT3P56703 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
WNT3P56703 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC22.99■■□□□ 1.27
WNT3P56703 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC22.98■■□□□ 1.27
WNT3P56703 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
WNT3P56703 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
WNT3P56703 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
WNT3P56703 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC22.98■■□□□ 1.27
WNT3P56703 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC22.98■■□□□ 1.27
WNT3P56703 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
WNT3P56703 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
WNT3P56703 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
WNT3P56703 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
WNT3P56703 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
WNT3P56703 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
WNT3P56703 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
WNT3P56703 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC22.97■■□□□ 1.27
WNT3P56703 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
WNT3P56703 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
WNT3P56703 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC22.97■■□□□ 1.27
WNT3P56703 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC22.97■■□□□ 1.27
WNT3P56703 AC096887.2-201ENST00000623443 1957 ntBASIC22.96■■□□□ 1.27
WNT3P56703 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC22.96■■□□□ 1.27
WNT3P56703 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
WNT3P56703 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
WNT3P56703 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC22.96■■□□□ 1.27
WNT3P56703 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC22.96■■□□□ 1.27
WNT3P56703 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
WNT3P56703 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC22.95■■□□□ 1.26
WNT3P56703 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC22.95■■□□□ 1.26
WNT3P56703 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
WNT3P56703 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC22.94■■□□□ 1.26
WNT3P56703 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
WNT3P56703 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC22.94■■□□□ 1.26
WNT3P56703 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
WNT3P56703 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC22.94■■□□□ 1.26
WNT3P56703 BRD4-212ENST00000630599 726 ntTSL 2 BASIC22.94■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 11.7 ms