Protein–RNA interactions for Protein: P56557

TMEM50B, Transmembrane protein 50B, humanhuman

Predictions only

Length 158 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50BP56557 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
TMEM50BP56557 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
TMEM50BP56557 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TMEM50BP56557 AC142381.3-201ENST00000568208 1670 ntBASIC20.6■□□□□ 0.89
TMEM50BP56557 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
TMEM50BP56557 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC20.59■□□□□ 0.89
TMEM50BP56557 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
TMEM50BP56557 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC20.59■□□□□ 0.89
TMEM50BP56557 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC20.59■□□□□ 0.89
TMEM50BP56557 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
TMEM50BP56557 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
TMEM50BP56557 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC20.59■□□□□ 0.89
TMEM50BP56557 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC20.59■□□□□ 0.89
TMEM50BP56557 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC20.58■□□□□ 0.89
TMEM50BP56557 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TMEM50BP56557 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
TMEM50BP56557 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TMEM50BP56557 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TMEM50BP56557 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TMEM50BP56557 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC20.57■□□□□ 0.88
TMEM50BP56557 CHML-204ENST00000638121 920 ntTSL 2 BASIC20.57■□□□□ 0.88
TMEM50BP56557 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TMEM50BP56557 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TMEM50BP56557 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TMEM50BP56557 AC022211.4-201ENST00000625094 2161 ntBASIC20.56■□□□□ 0.88
TMEM50BP56557 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
TMEM50BP56557 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TMEM50BP56557 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TMEM50BP56557 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TMEM50BP56557 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TMEM50BP56557 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
TMEM50BP56557 AC096887.2-201ENST00000623443 1957 ntBASIC20.55■□□□□ 0.88
TMEM50BP56557 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC20.55■□□□□ 0.88
TMEM50BP56557 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC20.55■□□□□ 0.88
TMEM50BP56557 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TMEM50BP56557 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TMEM50BP56557 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
TMEM50BP56557 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TMEM50BP56557 AC138932.3-201ENST00000567634 1902 ntBASIC20.54■□□□□ 0.88
TMEM50BP56557 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
TMEM50BP56557 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC20.54■□□□□ 0.88
TMEM50BP56557 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
TMEM50BP56557 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
TMEM50BP56557 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TMEM50BP56557 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC20.53■□□□□ 0.88
TMEM50BP56557 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TMEM50BP56557 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TMEM50BP56557 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TMEM50BP56557 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TMEM50BP56557 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
TMEM50BP56557 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TMEM50BP56557 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC20.52■□□□□ 0.87
TMEM50BP56557 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TMEM50BP56557 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC20.51■□□□□ 0.87
TMEM50BP56557 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
TMEM50BP56557 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC20.51■□□□□ 0.87
TMEM50BP56557 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC20.51■□□□□ 0.87
TMEM50BP56557 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC20.51■□□□□ 0.87
TMEM50BP56557 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
TMEM50BP56557 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC20.51■□□□□ 0.87
TMEM50BP56557 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC20.51■□□□□ 0.87
TMEM50BP56557 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TMEM50BP56557 THRA-202ENST00000394121 2260 ntTSL 2 BASIC20.51■□□□□ 0.87
TMEM50BP56557 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC20.51■□□□□ 0.87
TMEM50BP56557 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC20.51■□□□□ 0.87
TMEM50BP56557 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TMEM50BP56557 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
TMEM50BP56557 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TMEM50BP56557 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC20.5■□□□□ 0.87
TMEM50BP56557 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC20.49■□□□□ 0.87
TMEM50BP56557 PREB-202ENST00000406567 1910 ntTSL 5 BASIC20.49■□□□□ 0.87
TMEM50BP56557 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
TMEM50BP56557 HGH1-207ENST00000628266 258 ntTSL 5 BASIC20.49■□□□□ 0.87
TMEM50BP56557 AL139125.2-201ENST00000623134 1869 ntBASIC20.49■□□□□ 0.87
TMEM50BP56557 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TMEM50BP56557 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
TMEM50BP56557 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC20.49■□□□□ 0.87
TMEM50BP56557 MIR219A2-201ENST00000608502 1504 ntBASIC20.48■□□□□ 0.87
TMEM50BP56557 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TMEM50BP56557 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TMEM50BP56557 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
TMEM50BP56557 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC20.48■□□□□ 0.87
TMEM50BP56557 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC20.48■□□□□ 0.87
TMEM50BP56557 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TMEM50BP56557 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
TMEM50BP56557 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC20.47■□□□□ 0.87
TMEM50BP56557 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TMEM50BP56557 DUX4L13-201ENST00000554103 1267 ntBASIC20.47■□□□□ 0.87
TMEM50BP56557 DUX4L15-201ENST00000611059 1267 ntBASIC20.47■□□□□ 0.87
TMEM50BP56557 DUX4L23-201ENST00000615195 1269 ntBASIC20.47■□□□□ 0.87
TMEM50BP56557 DUX4L24-201ENST00000617576 1269 ntBASIC20.47■□□□□ 0.87
TMEM50BP56557 LINC01971-201ENST00000617888 1048 ntBASIC20.47■□□□□ 0.87
TMEM50BP56557 DUX4L22-201ENST00000618238 1269 ntBASIC20.47■□□□□ 0.87
TMEM50BP56557 DUX4L20-201ENST00000619712 1269 ntBASIC20.47■□□□□ 0.87
TMEM50BP56557 DUX4L21-201ENST00000622058 1269 ntBASIC20.47■□□□□ 0.87
TMEM50BP56557 DUX4L10-201ENST00000622460 1267 ntBASIC20.47■□□□□ 0.87
TMEM50BP56557 DUX4L25-201ENST00000624915 1269 ntBASIC20.47■□□□□ 0.87
TMEM50BP56557 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
TMEM50BP56557 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TMEM50BP56557 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms