Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
COL8A2P25067 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC20.62■□□□□ 0.89
COL8A2P25067 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC20.62■□□□□ 0.89
COL8A2P25067 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
COL8A2P25067 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC20.61■□□□□ 0.89
COL8A2P25067 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC20.61■□□□□ 0.89
COL8A2P25067 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
COL8A2P25067 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
COL8A2P25067 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
COL8A2P25067 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
COL8A2P25067 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
COL8A2P25067 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
COL8A2P25067 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC20.6■□□□□ 0.89
COL8A2P25067 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
COL8A2P25067 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
COL8A2P25067 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC20.59■□□□□ 0.89
COL8A2P25067 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
COL8A2P25067 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC20.59■□□□□ 0.89
COL8A2P25067 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC20.59■□□□□ 0.89
COL8A2P25067 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC20.59■□□□□ 0.89
COL8A2P25067 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
COL8A2P25067 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
COL8A2P25067 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
COL8A2P25067 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
COL8A2P25067 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
COL8A2P25067 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
COL8A2P25067 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
COL8A2P25067 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
COL8A2P25067 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC20.58■□□□□ 0.89
COL8A2P25067 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC20.58■□□□□ 0.89
COL8A2P25067 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
COL8A2P25067 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
COL8A2P25067 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
COL8A2P25067 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
COL8A2P25067 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC20.57■□□□□ 0.88
COL8A2P25067 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
COL8A2P25067 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC20.56■□□□□ 0.88
COL8A2P25067 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC20.56■□□□□ 0.88
COL8A2P25067 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
COL8A2P25067 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
COL8A2P25067 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC20.55■□□□□ 0.88
COL8A2P25067 AC018755.3-202ENST00000596210 929 ntBASIC20.55■□□□□ 0.88
COL8A2P25067 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
COL8A2P25067 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
COL8A2P25067 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
COL8A2P25067 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
COL8A2P25067 BHLHE23-202ENST00000612929 1109 ntBASIC20.54■□□□□ 0.88
COL8A2P25067 MIR6765-201ENST00000614092 87 ntBASIC20.54■□□□□ 0.88
COL8A2P25067 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
COL8A2P25067 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
COL8A2P25067 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
COL8A2P25067 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
COL8A2P25067 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
COL8A2P25067 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
COL8A2P25067 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
COL8A2P25067 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
COL8A2P25067 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
COL8A2P25067 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC20.53■□□□□ 0.88
COL8A2P25067 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
COL8A2P25067 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC20.53■□□□□ 0.88
COL8A2P25067 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
COL8A2P25067 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
COL8A2P25067 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
COL8A2P25067 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC20.52■□□□□ 0.88
COL8A2P25067 SHF-208ENST00000560734 1731 ntTSL 3 BASIC20.52■□□□□ 0.88
COL8A2P25067 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
COL8A2P25067 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
COL8A2P25067 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC20.51■□□□□ 0.87
COL8A2P25067 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC20.51■□□□□ 0.87
COL8A2P25067 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC20.51■□□□□ 0.87
COL8A2P25067 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
COL8A2P25067 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
COL8A2P25067 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
COL8A2P25067 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
COL8A2P25067 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
COL8A2P25067 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
COL8A2P25067 AP004609.3-201ENST00000610705 1884 ntBASIC20.5■□□□□ 0.87
COL8A2P25067 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
COL8A2P25067 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC20.5■□□□□ 0.87
COL8A2P25067 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
COL8A2P25067 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
COL8A2P25067 AC142472.1-201ENST00000612013 1741 ntBASIC20.5■□□□□ 0.87
COL8A2P25067 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
COL8A2P25067 RARRES2P1-201ENST00000474487 481 ntBASIC20.49■□□□□ 0.87
COL8A2P25067 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC20.49■□□□□ 0.87
COL8A2P25067 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
COL8A2P25067 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC20.49■□□□□ 0.87
COL8A2P25067 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
COL8A2P25067 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC20.49■□□□□ 0.87
COL8A2P25067 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
COL8A2P25067 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
COL8A2P25067 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
COL8A2P25067 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC20.48■□□□□ 0.87
COL8A2P25067 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
COL8A2P25067 AC139795.1-202ENST00000500444 432 ntBASIC20.48■□□□□ 0.87
COL8A2P25067 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC20.48■□□□□ 0.87
COL8A2P25067 AC010980.1-201ENST00000587192 1142 ntBASIC20.48■□□□□ 0.87
COL8A2P25067 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
COL8A2P25067 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
COL8A2P25067 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms