Protein–RNA interactions for Protein: P11836

MS4A1, B-lymphocyte antigen CD20, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A1P11836 DUSP8P4-201ENST00000399538 1761 ntBASIC31.26■■■□□ 2.59
MS4A1P11836 AC092803.2-201ENST00000564287 1899 ntBASIC31.26■■■□□ 2.59
MS4A1P11836 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC31.26■■■□□ 2.59
MS4A1P11836 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC31.25■■■□□ 2.59
MS4A1P11836 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC31.25■■■□□ 2.59
MS4A1P11836 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
MS4A1P11836 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
MS4A1P11836 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC31.24■■■□□ 2.59
MS4A1P11836 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
MS4A1P11836 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC31.24■■■□□ 2.59
MS4A1P11836 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC31.24■■■□□ 2.59
MS4A1P11836 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC31.24■■■□□ 2.59
MS4A1P11836 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC31.24■■■□□ 2.59
MS4A1P11836 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
MS4A1P11836 MED25-210ENST00000612854 801 ntTSL 5 BASIC31.23■■■□□ 2.59
MS4A1P11836 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
MS4A1P11836 MED25-214ENST00000622402 642 ntTSL 5 BASIC31.23■■■□□ 2.59
MS4A1P11836 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
MS4A1P11836 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
MS4A1P11836 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC31.22■■■□□ 2.59
MS4A1P11836 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC31.22■■■□□ 2.59
MS4A1P11836 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
MS4A1P11836 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC31.22■■■□□ 2.59
MS4A1P11836 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
MS4A1P11836 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
MS4A1P11836 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
MS4A1P11836 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
MS4A1P11836 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
MS4A1P11836 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
MS4A1P11836 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
MS4A1P11836 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC31.2■■■□□ 2.59
MS4A1P11836 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
MS4A1P11836 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC31.2■■■□□ 2.59
MS4A1P11836 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC31.2■■■□□ 2.59
MS4A1P11836 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
MS4A1P11836 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC31.2■■■□□ 2.59
MS4A1P11836 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC31.2■■■□□ 2.58
MS4A1P11836 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC31.2■■■□□ 2.58
MS4A1P11836 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC31.19■■■□□ 2.58
MS4A1P11836 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC31.19■■■□□ 2.58
MS4A1P11836 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC31.19■■■□□ 2.58
MS4A1P11836 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
MS4A1P11836 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
MS4A1P11836 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC31.18■■■□□ 2.58
MS4A1P11836 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
MS4A1P11836 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC31.17■■■□□ 2.58
MS4A1P11836 AC093323.1-202ENST00000635031 2045 ntBASIC31.17■■■□□ 2.58
MS4A1P11836 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC31.17■■■□□ 2.58
MS4A1P11836 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC31.16■■■□□ 2.58
MS4A1P11836 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
MS4A1P11836 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
MS4A1P11836 AL359504.2-201ENST00000605506 1601 ntBASIC31.16■■■□□ 2.58
MS4A1P11836 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC31.15■■■□□ 2.58
MS4A1P11836 MIR639-201ENST00000384974 98 ntBASIC31.15■■■□□ 2.58
MS4A1P11836 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC31.15■■■□□ 2.58
MS4A1P11836 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC31.15■■■□□ 2.58
MS4A1P11836 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC31.14■■■□□ 2.58
MS4A1P11836 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC31.14■■■□□ 2.58
MS4A1P11836 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC31.14■■■□□ 2.58
MS4A1P11836 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC31.14■■■□□ 2.58
MS4A1P11836 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC31.14■■■□□ 2.58
MS4A1P11836 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC31.14■■■□□ 2.58
MS4A1P11836 PVT1-219ENST00000523427 938 ntTSL 3 BASIC31.14■■■□□ 2.58
MS4A1P11836 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
MS4A1P11836 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC31.13■■■□□ 2.57
MS4A1P11836 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC31.13■■■□□ 2.57
MS4A1P11836 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
MS4A1P11836 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
MS4A1P11836 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
MS4A1P11836 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC31.12■■■□□ 2.57
MS4A1P11836 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC31.12■■■□□ 2.57
MS4A1P11836 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
MS4A1P11836 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
MS4A1P11836 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC31.11■■■□□ 2.57
MS4A1P11836 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
MS4A1P11836 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC31.11■■■□□ 2.57
MS4A1P11836 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC31.1■■■□□ 2.57
MS4A1P11836 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC31.1■■■□□ 2.57
MS4A1P11836 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
MS4A1P11836 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
MS4A1P11836 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
MS4A1P11836 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
MS4A1P11836 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
MS4A1P11836 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC31.1■■■□□ 2.57
MS4A1P11836 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC31.1■■■□□ 2.57
MS4A1P11836 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC31.1■■■□□ 2.57
MS4A1P11836 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC31.1■■■□□ 2.57
MS4A1P11836 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC31.1■■■□□ 2.57
MS4A1P11836 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
MS4A1P11836 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC31.09■■■□□ 2.57
MS4A1P11836 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC31.09■■■□□ 2.57
MS4A1P11836 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC31.08■■■□□ 2.57
MS4A1P11836 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
MS4A1P11836 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
MS4A1P11836 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
MS4A1P11836 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC31.08■■■□□ 2.57
MS4A1P11836 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC31.08■■■□□ 2.57
MS4A1P11836 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
MS4A1P11836 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
MS4A1P11836 SNAI3-AS1-204ENST00000567997 2048 ntBASIC31.07■■■□□ 2.56
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms