Protein–RNA interactions for Protein: P0DKX0

ZNF728, Zinc finger protein 728, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF728P0DKX0 MBP-237ENST00000579129 1052 ntTSL 5 BASIC20.6■□□□□ 0.89
ZNF728P0DKX0 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC20.6■□□□□ 0.89
ZNF728P0DKX0 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC20.6■□□□□ 0.89
ZNF728P0DKX0 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC20.6■□□□□ 0.89
ZNF728P0DKX0 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ZNF728P0DKX0 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ZNF728P0DKX0 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ZNF728P0DKX0 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ZNF728P0DKX0 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
ZNF728P0DKX0 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
ZNF728P0DKX0 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
ZNF728P0DKX0 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ZNF728P0DKX0 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC20.57■□□□□ 0.88
ZNF728P0DKX0 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC20.57■□□□□ 0.88
ZNF728P0DKX0 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ZNF728P0DKX0 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
ZNF728P0DKX0 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ZNF728P0DKX0 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
ZNF728P0DKX0 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
ZNF728P0DKX0 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
ZNF728P0DKX0 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ZNF728P0DKX0 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ZNF728P0DKX0 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC20.55■□□□□ 0.88
ZNF728P0DKX0 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC20.55■□□□□ 0.88
ZNF728P0DKX0 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
ZNF728P0DKX0 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
ZNF728P0DKX0 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC20.55■□□□□ 0.88
ZNF728P0DKX0 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ZNF728P0DKX0 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC20.54■□□□□ 0.88
ZNF728P0DKX0 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC20.54■□□□□ 0.88
ZNF728P0DKX0 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
ZNF728P0DKX0 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ZNF728P0DKX0 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ZNF728P0DKX0 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC20.54■□□□□ 0.88
ZNF728P0DKX0 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
ZNF728P0DKX0 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
ZNF728P0DKX0 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
ZNF728P0DKX0 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
ZNF728P0DKX0 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ZNF728P0DKX0 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ZNF728P0DKX0 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
ZNF728P0DKX0 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ZNF728P0DKX0 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC20.53■□□□□ 0.88
ZNF728P0DKX0 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC20.53■□□□□ 0.88
ZNF728P0DKX0 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ZNF728P0DKX0 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
ZNF728P0DKX0 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ZNF728P0DKX0 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ZNF728P0DKX0 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
ZNF728P0DKX0 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC20.53■□□□□ 0.88
ZNF728P0DKX0 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
ZNF728P0DKX0 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
ZNF728P0DKX0 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ZNF728P0DKX0 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
ZNF728P0DKX0 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
ZNF728P0DKX0 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
ZNF728P0DKX0 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ZNF728P0DKX0 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
ZNF728P0DKX0 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ZNF728P0DKX0 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ZNF728P0DKX0 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ZNF728P0DKX0 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
ZNF728P0DKX0 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ZNF728P0DKX0 MIR4449-201ENST00000578365 66 ntBASIC20.51■□□□□ 0.87
ZNF728P0DKX0 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ZNF728P0DKX0 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ZNF728P0DKX0 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
ZNF728P0DKX0 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
ZNF728P0DKX0 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
ZNF728P0DKX0 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
ZNF728P0DKX0 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ZNF728P0DKX0 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC20.5■□□□□ 0.87
ZNF728P0DKX0 SNAI3-AS1-204ENST00000567997 2048 ntBASIC20.5■□□□□ 0.87
ZNF728P0DKX0 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ZNF728P0DKX0 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC20.5■□□□□ 0.87
ZNF728P0DKX0 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
ZNF728P0DKX0 AC142472.1-201ENST00000612013 1741 ntBASIC20.5■□□□□ 0.87
ZNF728P0DKX0 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ZNF728P0DKX0 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ZNF728P0DKX0 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
ZNF728P0DKX0 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
ZNF728P0DKX0 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ZNF728P0DKX0 WHAMMP3-201ENST00000611636 1609 ntBASIC20.49■□□□□ 0.87
ZNF728P0DKX0 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
ZNF728P0DKX0 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
ZNF728P0DKX0 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
ZNF728P0DKX0 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
ZNF728P0DKX0 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ZNF728P0DKX0 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC20.48■□□□□ 0.87
ZNF728P0DKX0 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ZNF728P0DKX0 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC20.48■□□□□ 0.87
ZNF728P0DKX0 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
ZNF728P0DKX0 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
ZNF728P0DKX0 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
ZNF728P0DKX0 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ZNF728P0DKX0 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
ZNF728P0DKX0 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ZNF728P0DKX0 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC20.47■□□□□ 0.87
ZNF728P0DKX0 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC20.47■□□□□ 0.87
ZNF728P0DKX0 AC093323.1-202ENST00000635031 2045 ntBASIC20.47■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms