Protein–RNA interactions for Protein: P0CH08

RPL40A, Ubiquitin-60S ribosomal protein L40, yeastyeast

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPL40AP0CH08 YHR213W-BYHR213W-B 300 nt6.15□□□□□ -1.42
RPL40AP0CH08 SSP120YLR250W 705 nt6.15□□□□□ -1.42
RPL40AP0CH08 YAR064WYAR064W 300 nt6.15□□□□□ -1.42
RPL40AP0CH08 RPL43AYPR043W 279 nt6.15□□□□□ -1.42
RPL40AP0CH08 GSH1YJL101C 2037 nt6.15□□□□□ -1.43
RPL40AP0CH08 SKS1YPL026C 1509 nt6.15□□□□□ -1.43
RPL40AP0CH08 ERS1YCR075C 783 nt6.14□□□□□ -1.43
RPL40AP0CH08 BUG1YDL099W 1026 nt6.14□□□□□ -1.43
RPL40AP0CH08 YFL064CYFL064C 525 nt6.14□□□□□ -1.43
RPL40AP0CH08 PTC7YHR076W 1032 nt6.14□□□□□ -1.43
RPL40AP0CH08 YPR202WYPR202W 717 nt6.14□□□□□ -1.43
RPL40AP0CH08 ERG12YMR208W 1332 nt6.14□□□□□ -1.43
RPL40AP0CH08 GPH1YPR160W 2709 nt6.14□□□□□ -1.43
RPL40AP0CH08 SKY1YMR216C 2229 nt6.14□□□□□ -1.43
RPL40AP0CH08 RSP5YER125W 2430 nt6.14□□□□□ -1.43
RPL40AP0CH08 CDC7YDL017W 1524 nt6.13□□□□□ -1.43
RPL40AP0CH08 YHK8YHR048W 1545 nt6.13□□□□□ -1.43
RPL40AP0CH08 CLN1YMR199W 1641 nt6.13□□□□□ -1.43
RPL40AP0CH08 RDR1YOR380W 1641 nt6.13□□□□□ -1.43
RPL40AP0CH08 YDL119CYDL119C 924 nt6.12□□□□□ -1.43
RPL40AP0CH08 YAL045CYAL045C 309 nt6.12□□□□□ -1.43
RPL40AP0CH08 MRPL23YOR150W 492 nt6.12□□□□□ -1.43
RPL40AP0CH08 SEC62YPL094C 825 nt6.12□□□□□ -1.43
RPL40AP0CH08 OPI11YPR044C 354 nt6.12□□□□□ -1.43
RPL40AP0CH08 CCT8YJL008C 1707 nt6.11□□□□□ -1.43
RPL40AP0CH08 TDP1YBR223C 1635 nt6.11□□□□□ -1.43
RPL40AP0CH08 RVB2YPL235W 1416 nt6.11□□□□□ -1.43
RPL40AP0CH08 PHO85YPL031C 918 nt6.11□□□□□ -1.43
RPL40AP0CH08 CCT3YJL014W 1605 nt6.1□□□□□ -1.43
RPL40AP0CH08 CTF8YHR191C 402 nt6.1□□□□□ -1.43
RPL40AP0CH08 REC107YJR021C 945 nt6.1□□□□□ -1.43
RPL40AP0CH08 GCV3YAL044C 513 nt6.1□□□□□ -1.43
RPL40AP0CH08 SSO1YPL232W 873 nt6.1□□□□□ -1.43
RPL40AP0CH08 YPR127WYPR127W 1038 nt6.1□□□□□ -1.43
RPL40AP0CH08 VBA5YKR105C 1749 nt6.1□□□□□ -1.43
RPL40AP0CH08 ARP3YJR065C 1350 nt6.09□□□□□ -1.43
RPL40AP0CH08 MRPS28YDR337W 861 nt6.09□□□□□ -1.43
RPL40AP0CH08 DFM1YDR411C 1026 nt6.09□□□□□ -1.43
RPL40AP0CH08 HBN1YCL026C-B 582 nt6.09□□□□□ -1.43
RPL40AP0CH08 YBR241CYBR241C 1467 nt6.09□□□□□ -1.44
RPL40AP0CH08 MNS1YJR131W 1650 nt6.08□□□□□ -1.44
RPL40AP0CH08 CEM1YER061C 1329 nt6.08□□□□□ -1.44
RPL40AP0CH08 ECM38YLR299W 1983 nt6.08□□□□□ -1.44
RPL40AP0CH08 DAP1YPL170W 459 nt6.08□□□□□ -1.44
RPL40AP0CH08 YPR160C-AYPR160C-A 285 nt6.08□□□□□ -1.44
RPL40AP0CH08 BDF2YDL070W 1917 nt6.07□□□□□ -1.44
RPL40AP0CH08 YDR015CYDR015C 240 nt6.07□□□□□ -1.44
RPL40AP0CH08 SPO7YAL009W 780 nt6.07□□□□□ -1.44
RPL40AP0CH08 ERG27YLR100W 1044 nt6.07□□□□□ -1.44
RPL40AP0CH08 ECM30YLR436C 3825 nt6.07□□□□□ -1.44
RPL40AP0CH08 PGI1YBR196C 1665 nt6.07□□□□□ -1.44
RPL40AP0CH08 MRPL28YDR462W 444 nt6.06□□□□□ -1.44
RPL40AP0CH08 AAT2YLR027C 1257 nt6.06□□□□□ -1.44
RPL40AP0CH08 YNL285WYNL285W 372 nt6.06□□□□□ -1.44
RPL40AP0CH08 CTF19YPL018W 1110 nt6.06□□□□□ -1.44
RPL40AP0CH08 HED1YDR014W-A 489 nt6.05□□□□□ -1.44
RPL40AP0CH08 FPR2YDR519W 408 nt6.05□□□□□ -1.44
RPL40AP0CH08 CBP4YGR174C 513 nt6.05□□□□□ -1.44
RPL40AP0CH08 tR(ACG)JtR(ACG)J 73 nt6.05□□□□□ -1.44
RPL40AP0CH08 MIX17YMR002W 471 nt6.05□□□□□ -1.44
RPL40AP0CH08 PTC3YBL056W 1407 nt6.05□□□□□ -1.44
RPL40AP0CH08 HSM3YBR272C 1443 nt6.05□□□□□ -1.44
RPL40AP0CH08 DOT1YDR440W 1749 nt6.05□□□□□ -1.44
RPL40AP0CH08 IRC5YFR038W 2562 nt6.05□□□□□ -1.44
RPL40AP0CH08 ADE12YNL220W 1302 nt6.04□□□□□ -1.44
RPL40AP0CH08 YMR155WYMR155W 1644 nt6.04□□□□□ -1.44
RPL40AP0CH08 YCR075W-AYCR075W-A 228 nt6.04□□□□□ -1.44
RPL40AP0CH08 OPI8YKR035C 642 nt6.04□□□□□ -1.44
RPL40AP0CH08 YNR014WYNR014W 639 nt6.04□□□□□ -1.44
RPL40AP0CH08 MSO1YNR049C 633 nt6.04□□□□□ -1.44
RPL40AP0CH08 ADE13YLR359W 1449 nt6.04□□□□□ -1.44
RPL40AP0CH08 HSP12YFL014W 330 nt6.03□□□□□ -1.44
RPL40AP0CH08 COX16YJL003W 357 nt6.03□□□□□ -1.44
RPL40AP0CH08 GTT3YEL017W 1014 nt6.02□□□□□ -1.45
RPL40AP0CH08 RDN5-2RDN5-2 119 nt6.02□□□□□ -1.45
RPL40AP0CH08 RDN5-3RDN5-3 119 nt6.02□□□□□ -1.45
RPL40AP0CH08 ERG3YLR056W 1098 nt6.02□□□□□ -1.45
RPL40AP0CH08 RDN5-4RDN5-4 119 nt6.02□□□□□ -1.45
RPL40AP0CH08 RDN5-5RDN5-5 119 nt6.02□□□□□ -1.45
RPL40AP0CH08 TMA46YOR091W 1038 nt6.02□□□□□ -1.45
RPL40AP0CH08 ISN1YOR155C 1353 nt6.02□□□□□ -1.45
RPL40AP0CH08 CRF1YDR223W 1404 nt6.01□□□□□ -1.45
RPL40AP0CH08 ADY2YCR010C 852 nt6.01□□□□□ -1.45
RPL40AP0CH08 UGX2YDL169C 672 nt6.01□□□□□ -1.45
RPL40AP0CH08 SDH4YDR178W 546 nt6.01□□□□□ -1.45
RPL40AP0CH08 SYN8YAL014C 768 nt6.01□□□□□ -1.45
RPL40AP0CH08 YNL019CYNL019C 855 nt6.01□□□□□ -1.45
RPL40AP0CH08 YNL033WYNL033W 855 nt6.01□□□□□ -1.45
RPL40AP0CH08 GLN3YER040W 2193 nt6□□□□□ -1.45
RPL40AP0CH08 THR1YHR025W 1074 nt6□□□□□ -1.45
RPL40AP0CH08 LCB3YJL134W 1230 nt6□□□□□ -1.45
RPL40AP0CH08 MSG5YNL053W 1470 nt6□□□□□ -1.45
RPL40AP0CH08 CMK2YOL016C 1344 nt5.99□□□□□ -1.45
RPL40AP0CH08 YCR061WYCR061W 1896 nt5.99□□□□□ -1.45
RPL40AP0CH08 HMS2YJR147W 1077 nt5.99□□□□□ -1.45
RPL40AP0CH08 YAL056C-AYAL056C-A 351 nt5.99□□□□□ -1.45
RPL40AP0CH08 PHO3YBR092C 1404 nt5.99□□□□□ -1.45
RPL40AP0CH08 SLA2YNL243W 2907 nt5.98□□□□□ -1.45
RPL40AP0CH08 ARP2YDL029W 1176 nt5.98□□□□□ -1.45
RPL40AP0CH08 EFM4YIL064W 774 nt5.98□□□□□ -1.45
Retrieved 100 of 7,029 protein–RNA pairs in 56.5 ms