Protein–RNA interactions for Protein: O95206

PCDH8, Protocadherin-8, humanhuman

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8O95206 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC24.45■■□□□ 1.5
PCDH8O95206 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC24.45■■□□□ 1.5
PCDH8O95206 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC24.45■■□□□ 1.5
PCDH8O95206 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC24.45■■□□□ 1.5
PCDH8O95206 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC24.45■■□□□ 1.5
PCDH8O95206 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC24.45■■□□□ 1.5
PCDH8O95206 AC018755.3-202ENST00000596210 929 ntBASIC24.45■■□□□ 1.5
PCDH8O95206 BHLHE23-202ENST00000612929 1109 ntBASIC24.45■■□□□ 1.5
PCDH8O95206 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
PCDH8O95206 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
PCDH8O95206 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC24.44■■□□□ 1.5
PCDH8O95206 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC24.44■■□□□ 1.5
PCDH8O95206 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC24.44■■□□□ 1.5
PCDH8O95206 MIR6765-201ENST00000614092 87 ntBASIC24.44■■□□□ 1.5
PCDH8O95206 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC24.44■■□□□ 1.5
PCDH8O95206 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
PCDH8O95206 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC24.43■■□□□ 1.5
PCDH8O95206 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
PCDH8O95206 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC24.42■■□□□ 1.5
PCDH8O95206 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
PCDH8O95206 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
PCDH8O95206 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
PCDH8O95206 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
PCDH8O95206 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC24.41■■□□□ 1.5
PCDH8O95206 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC24.41■■□□□ 1.5
PCDH8O95206 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC24.41■■□□□ 1.5
PCDH8O95206 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC24.41■■□□□ 1.5
PCDH8O95206 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC24.41■■□□□ 1.5
PCDH8O95206 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC24.41■■□□□ 1.5
PCDH8O95206 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC24.41■■□□□ 1.5
PCDH8O95206 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
PCDH8O95206 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC24.4■■□□□ 1.5
PCDH8O95206 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
PCDH8O95206 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC24.4■■□□□ 1.5
PCDH8O95206 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
PCDH8O95206 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC24.39■■□□□ 1.5
PCDH8O95206 AC139795.1-202ENST00000500444 432 ntBASIC24.39■■□□□ 1.49
PCDH8O95206 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
PCDH8O95206 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
PCDH8O95206 RARRES2P1-201ENST00000474487 481 ntBASIC24.38■■□□□ 1.49
PCDH8O95206 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC24.37■■□□□ 1.49
PCDH8O95206 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC24.36■■□□□ 1.49
PCDH8O95206 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
PCDH8O95206 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
PCDH8O95206 HYI-210ENST00000486909 905 ntTSL 5 BASIC24.36■■□□□ 1.49
PCDH8O95206 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
PCDH8O95206 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC24.35■■□□□ 1.49
PCDH8O95206 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC24.35■■□□□ 1.49
PCDH8O95206 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
PCDH8O95206 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
PCDH8O95206 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC24.35■■□□□ 1.49
PCDH8O95206 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC24.35■■□□□ 1.49
PCDH8O95206 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
PCDH8O95206 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC24.34■■□□□ 1.49
PCDH8O95206 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC24.34■■□□□ 1.49
PCDH8O95206 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC24.33■■□□□ 1.49
PCDH8O95206 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC24.33■■□□□ 1.49
PCDH8O95206 AC010980.1-201ENST00000587192 1142 ntBASIC24.33■■□□□ 1.49
PCDH8O95206 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC24.33■■□□□ 1.48
PCDH8O95206 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.48
PCDH8O95206 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC24.33■■□□□ 1.48
PCDH8O95206 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC24.32■■□□□ 1.48
PCDH8O95206 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC24.32■■□□□ 1.48
PCDH8O95206 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC24.32■■□□□ 1.48
PCDH8O95206 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
PCDH8O95206 AC142472.1-201ENST00000612013 1741 ntBASIC24.32■■□□□ 1.48
PCDH8O95206 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC24.32■■□□□ 1.48
PCDH8O95206 AP004609.3-201ENST00000610705 1884 ntBASIC24.32■■□□□ 1.48
PCDH8O95206 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
PCDH8O95206 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC24.32■■□□□ 1.48
PCDH8O95206 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
PCDH8O95206 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC24.31■■□□□ 1.48
PCDH8O95206 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
PCDH8O95206 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
PCDH8O95206 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC24.31■■□□□ 1.48
PCDH8O95206 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC24.31■■□□□ 1.48
PCDH8O95206 AC074183.2-201ENST00000623112 922 ntBASIC24.31■■□□□ 1.48
PCDH8O95206 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC24.31■■□□□ 1.48
PCDH8O95206 IDNK-203ENST00000405990 629 ntTSL 2 BASIC24.3■■□□□ 1.48
PCDH8O95206 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
PCDH8O95206 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC24.3■■□□□ 1.48
PCDH8O95206 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
PCDH8O95206 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
PCDH8O95206 SHF-208ENST00000560734 1731 ntTSL 3 BASIC24.3■■□□□ 1.48
PCDH8O95206 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
PCDH8O95206 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
PCDH8O95206 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
PCDH8O95206 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
PCDH8O95206 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
PCDH8O95206 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC24.28■■□□□ 1.48
PCDH8O95206 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
PCDH8O95206 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
PCDH8O95206 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
PCDH8O95206 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
PCDH8O95206 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC24.27■■□□□ 1.48
PCDH8O95206 KRT8P33-201ENST00000508125 1423 ntBASIC24.27■■□□□ 1.48
PCDH8O95206 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
PCDH8O95206 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC24.26■■□□□ 1.47
PCDH8O95206 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC24.26■■□□□ 1.47
PCDH8O95206 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms