Protein–RNA interactions for Protein: O76075

DFFB, DNA fragmentation factor subunit beta, humanhuman

Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DFFBO76075 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC19.63■□□□□ 0.73
DFFBO76075 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
DFFBO76075 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
DFFBO76075 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC19.63■□□□□ 0.73
DFFBO76075 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
DFFBO76075 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
DFFBO76075 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
DFFBO76075 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
DFFBO76075 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
DFFBO76075 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
DFFBO76075 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
DFFBO76075 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC19.62■□□□□ 0.73
DFFBO76075 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
DFFBO76075 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
DFFBO76075 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
DFFBO76075 WHAMMP2-203ENST00000563942 1603 ntBASIC19.62■□□□□ 0.73
DFFBO76075 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
DFFBO76075 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
DFFBO76075 AC010501.1-201ENST00000606270 1962 ntBASIC19.61■□□□□ 0.73
DFFBO76075 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC19.61■□□□□ 0.73
DFFBO76075 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
DFFBO76075 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
DFFBO76075 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
DFFBO76075 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
DFFBO76075 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
DFFBO76075 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
DFFBO76075 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
DFFBO76075 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
DFFBO76075 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC19.6■□□□□ 0.73
DFFBO76075 MED17-227ENST00000640521 2047 ntTSL 5 BASIC19.59■□□□□ 0.73
DFFBO76075 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
DFFBO76075 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
DFFBO76075 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
DFFBO76075 AC044849.2-201ENST00000606596 710 ntBASIC19.59■□□□□ 0.73
DFFBO76075 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
DFFBO76075 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.73
DFFBO76075 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
DFFBO76075 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
DFFBO76075 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
DFFBO76075 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
DFFBO76075 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC19.57■□□□□ 0.72
DFFBO76075 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
DFFBO76075 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
DFFBO76075 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
DFFBO76075 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
DFFBO76075 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC19.57■□□□□ 0.72
DFFBO76075 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
DFFBO76075 AL139125.2-201ENST00000623134 1869 ntBASIC19.57■□□□□ 0.72
DFFBO76075 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC19.57■□□□□ 0.72
DFFBO76075 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
DFFBO76075 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
DFFBO76075 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
DFFBO76075 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
DFFBO76075 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
DFFBO76075 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
DFFBO76075 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
DFFBO76075 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC19.56■□□□□ 0.72
DFFBO76075 CIB2-204ENST00000557846 934 ntTSL 3 BASIC19.56■□□□□ 0.72
DFFBO76075 PREB-202ENST00000406567 1910 ntTSL 5 BASIC19.56■□□□□ 0.72
DFFBO76075 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
DFFBO76075 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
DFFBO76075 EI24-212ENST00000615917 1407 ntTSL 2 BASIC19.55■□□□□ 0.72
DFFBO76075 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
DFFBO76075 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
DFFBO76075 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
DFFBO76075 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
DFFBO76075 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
DFFBO76075 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC19.54■□□□□ 0.72
DFFBO76075 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC19.54■□□□□ 0.72
DFFBO76075 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
DFFBO76075 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
DFFBO76075 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
DFFBO76075 TMEM202-AS1-202ENST00000565181 2325 ntBASIC19.53■□□□□ 0.72
DFFBO76075 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC19.53■□□□□ 0.72
DFFBO76075 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC19.53■□□□□ 0.72
DFFBO76075 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC19.53■□□□□ 0.72
DFFBO76075 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC19.53■□□□□ 0.72
DFFBO76075 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
DFFBO76075 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
DFFBO76075 RPS2P35-201ENST00000443417 897 ntBASIC19.53■□□□□ 0.72
DFFBO76075 AC022211.4-201ENST00000625094 2161 ntBASIC19.53■□□□□ 0.72
DFFBO76075 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC19.53■□□□□ 0.72
DFFBO76075 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
DFFBO76075 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
DFFBO76075 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
DFFBO76075 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
DFFBO76075 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
DFFBO76075 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
DFFBO76075 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
DFFBO76075 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
DFFBO76075 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
DFFBO76075 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC19.51■□□□□ 0.71
DFFBO76075 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
DFFBO76075 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
DFFBO76075 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
DFFBO76075 BOD1-206ENST00000480951 814 ntTSL 2 BASIC19.51■□□□□ 0.71
DFFBO76075 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
DFFBO76075 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
DFFBO76075 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
DFFBO76075 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 12.1 ms