Protein–RNA interactions for Protein: O75679

RFPL3, Ret finger protein-like 3, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL3O75679 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
RFPL3O75679 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
RFPL3O75679 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
RFPL3O75679 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC23.82■■□□□ 1.4
RFPL3O75679 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
RFPL3O75679 MTX2-204ENST00000443241 799 ntTSL 3 BASIC23.82■■□□□ 1.4
RFPL3O75679 PRTG-204ENST00000561292 833 ntTSL 3 BASIC23.82■■□□□ 1.4
RFPL3O75679 AC103724.3-201ENST00000564481 992 ntBASIC23.82■■□□□ 1.4
RFPL3O75679 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
RFPL3O75679 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
RFPL3O75679 AL139393.2-201ENST00000608721 2025 ntBASIC23.81■■□□□ 1.4
RFPL3O75679 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC23.81■■□□□ 1.4
RFPL3O75679 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC23.81■■□□□ 1.4
RFPL3O75679 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
RFPL3O75679 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
RFPL3O75679 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
RFPL3O75679 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
RFPL3O75679 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
RFPL3O75679 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
RFPL3O75679 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
RFPL3O75679 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC23.8■■□□□ 1.4
RFPL3O75679 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
RFPL3O75679 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
RFPL3O75679 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
RFPL3O75679 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC23.79■■□□□ 1.4
RFPL3O75679 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC23.79■■□□□ 1.4
RFPL3O75679 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
RFPL3O75679 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
RFPL3O75679 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
RFPL3O75679 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC23.78■■□□□ 1.4
RFPL3O75679 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
RFPL3O75679 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
RFPL3O75679 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
RFPL3O75679 AL359504.2-201ENST00000605506 1601 ntBASIC23.77■■□□□ 1.4
RFPL3O75679 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
RFPL3O75679 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC23.77■■□□□ 1.4
RFPL3O75679 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
RFPL3O75679 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
RFPL3O75679 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
RFPL3O75679 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
RFPL3O75679 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC23.76■■□□□ 1.39
RFPL3O75679 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
RFPL3O75679 AL356441.2-201ENST00000443009 864 ntBASIC23.76■■□□□ 1.39
RFPL3O75679 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
RFPL3O75679 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
RFPL3O75679 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
RFPL3O75679 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC23.75■■□□□ 1.39
RFPL3O75679 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
RFPL3O75679 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
RFPL3O75679 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
RFPL3O75679 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
RFPL3O75679 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
RFPL3O75679 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC23.74■■□□□ 1.39
RFPL3O75679 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC23.74■■□□□ 1.39
RFPL3O75679 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC23.73■■□□□ 1.39
RFPL3O75679 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
RFPL3O75679 AC019171.1-201ENST00000601251 1056 ntBASIC23.73■■□□□ 1.39
RFPL3O75679 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC23.73■■□□□ 1.39
RFPL3O75679 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
RFPL3O75679 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC23.72■■□□□ 1.39
RFPL3O75679 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
RFPL3O75679 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
RFPL3O75679 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
RFPL3O75679 RNF146-205ENST00000477776 762 ntTSL 3 BASIC23.71■■□□□ 1.39
RFPL3O75679 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC23.71■■□□□ 1.39
RFPL3O75679 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC23.71■■□□□ 1.39
RFPL3O75679 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
RFPL3O75679 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
RFPL3O75679 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC23.7■■□□□ 1.38
RFPL3O75679 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC23.7■■□□□ 1.38
RFPL3O75679 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC23.7■■□□□ 1.38
RFPL3O75679 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
RFPL3O75679 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
RFPL3O75679 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
RFPL3O75679 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC23.69■■□□□ 1.38
RFPL3O75679 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC23.69■■□□□ 1.38
RFPL3O75679 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC23.69■■□□□ 1.38
RFPL3O75679 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
RFPL3O75679 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
RFPL3O75679 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
RFPL3O75679 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
RFPL3O75679 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC23.68■■□□□ 1.38
RFPL3O75679 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC23.68■■□□□ 1.38
RFPL3O75679 AC239859.2-201ENST00000444165 318 ntBASIC23.68■■□□□ 1.38
RFPL3O75679 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
RFPL3O75679 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC23.68■■□□□ 1.38
RFPL3O75679 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC23.67■■□□□ 1.38
RFPL3O75679 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
RFPL3O75679 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC23.67■■□□□ 1.38
RFPL3O75679 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC23.67■■□□□ 1.38
RFPL3O75679 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC23.67■■□□□ 1.38
RFPL3O75679 AC087393.1-201ENST00000582896 145 ntBASIC23.67■■□□□ 1.38
RFPL3O75679 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
RFPL3O75679 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
RFPL3O75679 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
RFPL3O75679 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
RFPL3O75679 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
RFPL3O75679 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC23.65■■□□□ 1.38
RFPL3O75679 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC23.65■■□□□ 1.38
RFPL3O75679 TK2-216ENST00000564917 1156 ntTSL 3 BASIC23.65■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms