Protein–RNA interactions for Protein: E7ERA6

RNF223, RING finger protein 223, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF223E7ERA6 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RNF223E7ERA6 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
RNF223E7ERA6 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RNF223E7ERA6 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
RNF223E7ERA6 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC20.4■□□□□ 0.86
RNF223E7ERA6 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC20.4■□□□□ 0.86
RNF223E7ERA6 AC019171.1-201ENST00000601251 1056 ntBASIC20.4■□□□□ 0.86
RNF223E7ERA6 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC20.4■□□□□ 0.86
RNF223E7ERA6 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
RNF223E7ERA6 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
RNF223E7ERA6 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
RNF223E7ERA6 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RNF223E7ERA6 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
RNF223E7ERA6 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RNF223E7ERA6 AC087393.1-201ENST00000582896 145 ntBASIC20.39■□□□□ 0.85
RNF223E7ERA6 WHAMMP3-201ENST00000611636 1609 ntBASIC20.38■□□□□ 0.85
RNF223E7ERA6 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RNF223E7ERA6 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
RNF223E7ERA6 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RNF223E7ERA6 TK2-216ENST00000564917 1156 ntTSL 3 BASIC20.38■□□□□ 0.85
RNF223E7ERA6 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC20.38■□□□□ 0.85
RNF223E7ERA6 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC20.38■□□□□ 0.85
RNF223E7ERA6 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC20.38■□□□□ 0.85
RNF223E7ERA6 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RNF223E7ERA6 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
RNF223E7ERA6 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC20.37■□□□□ 0.85
RNF223E7ERA6 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RNF223E7ERA6 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
RNF223E7ERA6 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RNF223E7ERA6 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RNF223E7ERA6 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RNF223E7ERA6 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC20.37■□□□□ 0.85
RNF223E7ERA6 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RNF223E7ERA6 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
RNF223E7ERA6 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
RNF223E7ERA6 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RNF223E7ERA6 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RNF223E7ERA6 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RNF223E7ERA6 AC008406.3-201ENST00000620001 1374 ntBASIC20.36■□□□□ 0.85
RNF223E7ERA6 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RNF223E7ERA6 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RNF223E7ERA6 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RNF223E7ERA6 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RNF223E7ERA6 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC20.36■□□□□ 0.85
RNF223E7ERA6 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RNF223E7ERA6 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
RNF223E7ERA6 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RNF223E7ERA6 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RNF223E7ERA6 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
RNF223E7ERA6 RPS2P7-201ENST00000447334 885 ntBASIC20.35■□□□□ 0.85
RNF223E7ERA6 Z92544.1-202ENST00000571933 1220 ntBASIC20.35■□□□□ 0.85
RNF223E7ERA6 GRAMD4P7-201ENST00000578182 1232 ntBASIC20.35■□□□□ 0.85
RNF223E7ERA6 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC20.35■□□□□ 0.85
RNF223E7ERA6 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
RNF223E7ERA6 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RNF223E7ERA6 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC20.34■□□□□ 0.85
RNF223E7ERA6 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC20.34■□□□□ 0.85
RNF223E7ERA6 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
RNF223E7ERA6 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
RNF223E7ERA6 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RNF223E7ERA6 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RNF223E7ERA6 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
RNF223E7ERA6 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RNF223E7ERA6 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
RNF223E7ERA6 CREM-229ENST00000474362 1030 ntTSL 2 BASIC20.33■□□□□ 0.85
RNF223E7ERA6 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC20.33■□□□□ 0.85
RNF223E7ERA6 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF223E7ERA6 LONRF2P2-201ENST00000439212 571 ntBASIC20.32■□□□□ 0.84
RNF223E7ERA6 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC20.32■□□□□ 0.84
RNF223E7ERA6 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RNF223E7ERA6 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC20.32■□□□□ 0.84
RNF223E7ERA6 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RNF223E7ERA6 KRT125P-201ENST00000546827 989 ntBASIC20.31■□□□□ 0.84
RNF223E7ERA6 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
RNF223E7ERA6 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC20.3■□□□□ 0.84
RNF223E7ERA6 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RNF223E7ERA6 MIR935-201ENST00000401179 91 ntBASIC20.3■□□□□ 0.84
RNF223E7ERA6 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RNF223E7ERA6 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RNF223E7ERA6 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RNF223E7ERA6 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RNF223E7ERA6 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC20.3■□□□□ 0.84
RNF223E7ERA6 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RNF223E7ERA6 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC20.29■□□□□ 0.84
RNF223E7ERA6 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RNF223E7ERA6 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC20.29■□□□□ 0.84
RNF223E7ERA6 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RNF223E7ERA6 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RNF223E7ERA6 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RNF223E7ERA6 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RNF223E7ERA6 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RNF223E7ERA6 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RNF223E7ERA6 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
RNF223E7ERA6 LSM7-203ENST00000585409 512 ntTSL 2 BASIC20.27■□□□□ 0.84
RNF223E7ERA6 MIR4787-201ENST00000607364 84 ntBASIC20.27■□□□□ 0.84
RNF223E7ERA6 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC20.27■□□□□ 0.84
RNF223E7ERA6 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RNF223E7ERA6 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RNF223E7ERA6 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
RNF223E7ERA6 BX664725.1-201ENST00000438252 379 ntBASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 13.3 ms