Protein–RNA interactions for Protein: A6NLU0

RFPL4A, Ret finger protein-like 4A, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL4AA6NLU0 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC20.9■□□□□ 0.94
RFPL4AA6NLU0 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
RFPL4AA6NLU0 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RFPL4AA6NLU0 CHST11-203ENST00000547956 936 ntTSL 2 BASIC20.89■□□□□ 0.93
RFPL4AA6NLU0 METRNL-202ENST00000570778 967 ntTSL 5 BASIC20.89■□□□□ 0.93
RFPL4AA6NLU0 AC148477.6-201ENST00000623746 465 ntBASIC20.89■□□□□ 0.93
RFPL4AA6NLU0 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC20.89■□□□□ 0.93
RFPL4AA6NLU0 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
RFPL4AA6NLU0 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RFPL4AA6NLU0 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RFPL4AA6NLU0 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RFPL4AA6NLU0 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC20.88■□□□□ 0.93
RFPL4AA6NLU0 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
RFPL4AA6NLU0 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
RFPL4AA6NLU0 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
RFPL4AA6NLU0 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RFPL4AA6NLU0 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC20.88■□□□□ 0.93
RFPL4AA6NLU0 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
RFPL4AA6NLU0 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC20.87■□□□□ 0.93
RFPL4AA6NLU0 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC20.87■□□□□ 0.93
RFPL4AA6NLU0 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RFPL4AA6NLU0 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RFPL4AA6NLU0 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RFPL4AA6NLU0 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RFPL4AA6NLU0 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
RFPL4AA6NLU0 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC20.86■□□□□ 0.93
RFPL4AA6NLU0 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
RFPL4AA6NLU0 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC20.86■□□□□ 0.93
RFPL4AA6NLU0 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC20.86■□□□□ 0.93
RFPL4AA6NLU0 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
RFPL4AA6NLU0 THRA-202ENST00000394121 2260 ntTSL 2 BASIC20.86■□□□□ 0.93
RFPL4AA6NLU0 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
RFPL4AA6NLU0 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RFPL4AA6NLU0 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RFPL4AA6NLU0 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RFPL4AA6NLU0 WHAMMP3-201ENST00000611636 1609 ntBASIC20.86■□□□□ 0.93
RFPL4AA6NLU0 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC20.85■□□□□ 0.93
RFPL4AA6NLU0 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RFPL4AA6NLU0 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
RFPL4AA6NLU0 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RFPL4AA6NLU0 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
RFPL4AA6NLU0 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RFPL4AA6NLU0 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
RFPL4AA6NLU0 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
RFPL4AA6NLU0 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RFPL4AA6NLU0 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC20.85■□□□□ 0.93
RFPL4AA6NLU0 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC20.84■□□□□ 0.93
RFPL4AA6NLU0 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC20.84■□□□□ 0.93
RFPL4AA6NLU0 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RFPL4AA6NLU0 DUSP8P4-201ENST00000399538 1761 ntBASIC20.84■□□□□ 0.93
RFPL4AA6NLU0 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RFPL4AA6NLU0 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RFPL4AA6NLU0 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
RFPL4AA6NLU0 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
RFPL4AA6NLU0 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC20.83■□□□□ 0.92
RFPL4AA6NLU0 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
RFPL4AA6NLU0 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC20.82■□□□□ 0.92
RFPL4AA6NLU0 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC20.82■□□□□ 0.92
RFPL4AA6NLU0 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC20.82■□□□□ 0.92
RFPL4AA6NLU0 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RFPL4AA6NLU0 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
RFPL4AA6NLU0 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RFPL4AA6NLU0 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RFPL4AA6NLU0 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RFPL4AA6NLU0 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RFPL4AA6NLU0 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
RFPL4AA6NLU0 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RFPL4AA6NLU0 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RFPL4AA6NLU0 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RFPL4AA6NLU0 MIR639-201ENST00000384974 98 ntBASIC20.8■□□□□ 0.92
RFPL4AA6NLU0 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RFPL4AA6NLU0 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RFPL4AA6NLU0 RPS2-202ENST00000526522 924 ntTSL 2 BASIC20.8■□□□□ 0.92
RFPL4AA6NLU0 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC20.8■□□□□ 0.92
RFPL4AA6NLU0 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
RFPL4AA6NLU0 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
RFPL4AA6NLU0 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
RFPL4AA6NLU0 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
RFPL4AA6NLU0 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RFPL4AA6NLU0 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RFPL4AA6NLU0 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RFPL4AA6NLU0 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RFPL4AA6NLU0 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RFPL4AA6NLU0 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
RFPL4AA6NLU0 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
RFPL4AA6NLU0 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
RFPL4AA6NLU0 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RFPL4AA6NLU0 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC20.78■□□□□ 0.92
RFPL4AA6NLU0 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC20.78■□□□□ 0.92
RFPL4AA6NLU0 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC20.78■□□□□ 0.92
RFPL4AA6NLU0 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
RFPL4AA6NLU0 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RFPL4AA6NLU0 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.92
RFPL4AA6NLU0 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RFPL4AA6NLU0 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC20.77■□□□□ 0.92
RFPL4AA6NLU0 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC20.77■□□□□ 0.92
RFPL4AA6NLU0 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RFPL4AA6NLU0 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC20.77■□□□□ 0.91
RFPL4AA6NLU0 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
RFPL4AA6NLU0 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 10.8 ms