Protein–RNA interactions for Protein: A6NI56

CCDC154, Coiled-coil domain-containing protein 154, humanhuman

Predictions only

Length 674 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC154A6NI56 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CCDC154A6NI56 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC23.24■■□□□ 1.31
CCDC154A6NI56 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
CCDC154A6NI56 LINC01971-201ENST00000617888 1048 ntBASIC23.24■■□□□ 1.31
CCDC154A6NI56 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC23.23■■□□□ 1.31
CCDC154A6NI56 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC23.23■■□□□ 1.31
CCDC154A6NI56 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
CCDC154A6NI56 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
CCDC154A6NI56 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
CCDC154A6NI56 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CCDC154A6NI56 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
CCDC154A6NI56 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC23.22■■□□□ 1.31
CCDC154A6NI56 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC23.22■■□□□ 1.31
CCDC154A6NI56 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC23.22■■□□□ 1.31
CCDC154A6NI56 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
CCDC154A6NI56 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC23.22■■□□□ 1.31
CCDC154A6NI56 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
CCDC154A6NI56 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC23.21■■□□□ 1.31
CCDC154A6NI56 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CCDC154A6NI56 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
CCDC154A6NI56 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CCDC154A6NI56 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
CCDC154A6NI56 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CCDC154A6NI56 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CCDC154A6NI56 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CCDC154A6NI56 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CCDC154A6NI56 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
CCDC154A6NI56 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
CCDC154A6NI56 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
CCDC154A6NI56 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CCDC154A6NI56 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC23.2■■□□□ 1.3
CCDC154A6NI56 AC142381.3-201ENST00000568208 1670 ntBASIC23.19■■□□□ 1.3
CCDC154A6NI56 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CCDC154A6NI56 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
CCDC154A6NI56 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC23.19■■□□□ 1.3
CCDC154A6NI56 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC23.19■■□□□ 1.3
CCDC154A6NI56 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC23.19■■□□□ 1.3
CCDC154A6NI56 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
CCDC154A6NI56 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CCDC154A6NI56 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CCDC154A6NI56 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CCDC154A6NI56 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CCDC154A6NI56 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CCDC154A6NI56 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC23.18■■□□□ 1.3
CCDC154A6NI56 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC23.17■■□□□ 1.3
CCDC154A6NI56 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC23.17■■□□□ 1.3
CCDC154A6NI56 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
CCDC154A6NI56 DUX4L13-201ENST00000554103 1267 ntBASIC23.17■■□□□ 1.3
CCDC154A6NI56 DUX4L15-201ENST00000611059 1267 ntBASIC23.17■■□□□ 1.3
CCDC154A6NI56 DUX4L23-201ENST00000615195 1269 ntBASIC23.17■■□□□ 1.3
CCDC154A6NI56 DUX4L24-201ENST00000617576 1269 ntBASIC23.17■■□□□ 1.3
CCDC154A6NI56 DUX4L22-201ENST00000618238 1269 ntBASIC23.17■■□□□ 1.3
CCDC154A6NI56 DUX4L20-201ENST00000619712 1269 ntBASIC23.17■■□□□ 1.3
CCDC154A6NI56 DUX4L21-201ENST00000622058 1269 ntBASIC23.17■■□□□ 1.3
CCDC154A6NI56 DUX4L10-201ENST00000622460 1267 ntBASIC23.17■■□□□ 1.3
CCDC154A6NI56 DUX4L25-201ENST00000624915 1269 ntBASIC23.17■■□□□ 1.3
CCDC154A6NI56 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CCDC154A6NI56 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CCDC154A6NI56 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
CCDC154A6NI56 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CCDC154A6NI56 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
CCDC154A6NI56 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
CCDC154A6NI56 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
CCDC154A6NI56 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
CCDC154A6NI56 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC23.15■■□□□ 1.3
CCDC154A6NI56 CHST11-202ENST00000546689 756 ntTSL 2 BASIC23.15■■□□□ 1.3
CCDC154A6NI56 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC23.15■■□□□ 1.3
CCDC154A6NI56 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
CCDC154A6NI56 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
CCDC154A6NI56 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC23.15■■□□□ 1.3
CCDC154A6NI56 MED17-227ENST00000640521 2047 ntTSL 5 BASIC23.15■■□□□ 1.3
CCDC154A6NI56 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
CCDC154A6NI56 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC23.14■■□□□ 1.3
CCDC154A6NI56 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
CCDC154A6NI56 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.3
CCDC154A6NI56 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
CCDC154A6NI56 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CCDC154A6NI56 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC23.14■■□□□ 1.29
CCDC154A6NI56 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC23.14■■□□□ 1.29
CCDC154A6NI56 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC23.13■■□□□ 1.29
CCDC154A6NI56 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CCDC154A6NI56 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC23.13■■□□□ 1.29
CCDC154A6NI56 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CCDC154A6NI56 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC23.12■■□□□ 1.29
CCDC154A6NI56 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
CCDC154A6NI56 AC008813.1-201ENST00000536597 885 ntBASIC23.12■■□□□ 1.29
CCDC154A6NI56 AC022211.4-201ENST00000625094 2161 ntBASIC23.12■■□□□ 1.29
CCDC154A6NI56 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC23.11■■□□□ 1.29
CCDC154A6NI56 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC23.11■■□□□ 1.29
CCDC154A6NI56 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
CCDC154A6NI56 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC23.11■■□□□ 1.29
CCDC154A6NI56 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC23.11■■□□□ 1.29
CCDC154A6NI56 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
CCDC154A6NI56 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
CCDC154A6NI56 DUX4L11-201ENST00000611504 1267 ntBASIC23.11■■□□□ 1.29
CCDC154A6NI56 DUX4L12-201ENST00000614593 1267 ntBASIC23.11■■□□□ 1.29
CCDC154A6NI56 DUX4L14-201ENST00000621227 1267 ntBASIC23.11■■□□□ 1.29
CCDC154A6NI56 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC23.11■■□□□ 1.29
CCDC154A6NI56 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CCDC154A6NI56 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms