Protein–RNA interactions for Protein: A0A1B0GVL6

TMEM238L, HCG1800530, isoform CRA_b, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM238LA0A1B0GVL6 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
TMEM238LA0A1B0GVL6 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
TMEM238LA0A1B0GVL6 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
TMEM238LA0A1B0GVL6 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TMEM238LA0A1B0GVL6 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TMEM238LA0A1B0GVL6 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TMEM238LA0A1B0GVL6 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
TMEM238LA0A1B0GVL6 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TMEM238LA0A1B0GVL6 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TMEM238LA0A1B0GVL6 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TMEM238LA0A1B0GVL6 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
TMEM238LA0A1B0GVL6 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TMEM238LA0A1B0GVL6 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
TMEM238LA0A1B0GVL6 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TMEM238LA0A1B0GVL6 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.31
TMEM238LA0A1B0GVL6 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC17.02■□□□□ 0.31
TMEM238LA0A1B0GVL6 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
TMEM238LA0A1B0GVL6 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
TMEM238LA0A1B0GVL6 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
TMEM238LA0A1B0GVL6 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC17.01■□□□□ 0.31
TMEM238LA0A1B0GVL6 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TMEM238LA0A1B0GVL6 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TMEM238LA0A1B0GVL6 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
TMEM238LA0A1B0GVL6 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TMEM238LA0A1B0GVL6 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
TMEM238LA0A1B0GVL6 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TMEM238LA0A1B0GVL6 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC17■□□□□ 0.31
TMEM238LA0A1B0GVL6 AP004833.2-201ENST00000532228 1454 ntBASIC17■□□□□ 0.31
TMEM238LA0A1B0GVL6 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TMEM238LA0A1B0GVL6 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC17■□□□□ 0.31
TMEM238LA0A1B0GVL6 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TMEM238LA0A1B0GVL6 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TMEM238LA0A1B0GVL6 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC17■□□□□ 0.31
TMEM238LA0A1B0GVL6 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
TMEM238LA0A1B0GVL6 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TMEM238LA0A1B0GVL6 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TMEM238LA0A1B0GVL6 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TMEM238LA0A1B0GVL6 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TMEM238LA0A1B0GVL6 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC16.99■□□□□ 0.31
TMEM238LA0A1B0GVL6 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
TMEM238LA0A1B0GVL6 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TMEM238LA0A1B0GVL6 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
TMEM238LA0A1B0GVL6 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
TMEM238LA0A1B0GVL6 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
TMEM238LA0A1B0GVL6 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
TMEM238LA0A1B0GVL6 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TMEM238LA0A1B0GVL6 AC092803.2-201ENST00000564287 1899 ntBASIC16.97■□□□□ 0.31
TMEM238LA0A1B0GVL6 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TMEM238LA0A1B0GVL6 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TMEM238LA0A1B0GVL6 ERN1-208ENST00000606895 2068 ntBASIC16.97■□□□□ 0.31
TMEM238LA0A1B0GVL6 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
TMEM238LA0A1B0GVL6 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC16.97■□□□□ 0.31
TMEM238LA0A1B0GVL6 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TMEM238LA0A1B0GVL6 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TMEM238LA0A1B0GVL6 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TMEM238LA0A1B0GVL6 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TMEM238LA0A1B0GVL6 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TMEM238LA0A1B0GVL6 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
TMEM238LA0A1B0GVL6 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
TMEM238LA0A1B0GVL6 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TMEM238LA0A1B0GVL6 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC16.96■□□□□ 0.31
TMEM238LA0A1B0GVL6 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TMEM238LA0A1B0GVL6 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC16.96■□□□□ 0.3
TMEM238LA0A1B0GVL6 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
TMEM238LA0A1B0GVL6 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TMEM238LA0A1B0GVL6 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
TMEM238LA0A1B0GVL6 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TMEM238LA0A1B0GVL6 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TMEM238LA0A1B0GVL6 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC16.95■□□□□ 0.3
TMEM238LA0A1B0GVL6 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TMEM238LA0A1B0GVL6 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TMEM238LA0A1B0GVL6 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
TMEM238LA0A1B0GVL6 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TMEM238LA0A1B0GVL6 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
TMEM238LA0A1B0GVL6 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TMEM238LA0A1B0GVL6 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TMEM238LA0A1B0GVL6 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
TMEM238LA0A1B0GVL6 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
TMEM238LA0A1B0GVL6 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TMEM238LA0A1B0GVL6 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
TMEM238LA0A1B0GVL6 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
TMEM238LA0A1B0GVL6 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
TMEM238LA0A1B0GVL6 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TMEM238LA0A1B0GVL6 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC16.93■□□□□ 0.3
TMEM238LA0A1B0GVL6 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC16.93■□□□□ 0.3
TMEM238LA0A1B0GVL6 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TMEM238LA0A1B0GVL6 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
TMEM238LA0A1B0GVL6 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC16.92■□□□□ 0.3
TMEM238LA0A1B0GVL6 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TMEM238LA0A1B0GVL6 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TMEM238LA0A1B0GVL6 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
TMEM238LA0A1B0GVL6 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TMEM238LA0A1B0GVL6 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TMEM238LA0A1B0GVL6 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
TMEM238LA0A1B0GVL6 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TMEM238LA0A1B0GVL6 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TMEM238LA0A1B0GVL6 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TMEM238LA0A1B0GVL6 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TMEM238LA0A1B0GVL6 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TMEM238LA0A1B0GVL6 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms