Protein–RNA interactions for Protein: A0A0B4J262

TRAV8-6, T-cell receptor alpha variable 8-6 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-6A0A0B4J262 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRAV8-6A0A0B4J262 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRAV8-6A0A0B4J262 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TRAV8-6A0A0B4J262 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRAV8-6A0A0B4J262 LINC00273-201ENST00000539813 1452 ntBASIC17.69■□□□□ 0.42
TRAV8-6A0A0B4J262 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
TRAV8-6A0A0B4J262 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRAV8-6A0A0B4J262 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRAV8-6A0A0B4J262 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRAV8-6A0A0B4J262 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRAV8-6A0A0B4J262 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRAV8-6A0A0B4J262 AC021231.2-201ENST00000594613 730 ntBASIC17.68■□□□□ 0.42
TRAV8-6A0A0B4J262 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
TRAV8-6A0A0B4J262 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRAV8-6A0A0B4J262 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRAV8-6A0A0B4J262 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRAV8-6A0A0B4J262 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRAV8-6A0A0B4J262 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
TRAV8-6A0A0B4J262 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRAV8-6A0A0B4J262 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRAV8-6A0A0B4J262 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
TRAV8-6A0A0B4J262 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRAV8-6A0A0B4J262 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRAV8-6A0A0B4J262 AC145676.1-201ENST00000514988 2004 ntBASIC17.67■□□□□ 0.42
TRAV8-6A0A0B4J262 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRAV8-6A0A0B4J262 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAV8-6A0A0B4J262 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAV8-6A0A0B4J262 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAV8-6A0A0B4J262 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
TRAV8-6A0A0B4J262 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRAV8-6A0A0B4J262 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC17.66■□□□□ 0.42
TRAV8-6A0A0B4J262 CALM3-209ENST00000597743 577 ntTSL 4 BASIC17.66■□□□□ 0.42
TRAV8-6A0A0B4J262 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC17.66■□□□□ 0.42
TRAV8-6A0A0B4J262 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAV8-6A0A0B4J262 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAV8-6A0A0B4J262 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC17.65■□□□□ 0.42
TRAV8-6A0A0B4J262 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC17.65■□□□□ 0.42
TRAV8-6A0A0B4J262 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAV8-6A0A0B4J262 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC17.65■□□□□ 0.42
TRAV8-6A0A0B4J262 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAV8-6A0A0B4J262 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAV8-6A0A0B4J262 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC17.65■□□□□ 0.42
TRAV8-6A0A0B4J262 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAV8-6A0A0B4J262 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
TRAV8-6A0A0B4J262 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAV8-6A0A0B4J262 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAV8-6A0A0B4J262 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC17.65■□□□□ 0.42
TRAV8-6A0A0B4J262 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRAV8-6A0A0B4J262 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRAV8-6A0A0B4J262 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRAV8-6A0A0B4J262 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRAV8-6A0A0B4J262 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRAV8-6A0A0B4J262 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TRAV8-6A0A0B4J262 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
TRAV8-6A0A0B4J262 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRAV8-6A0A0B4J262 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC17.63■□□□□ 0.41
TRAV8-6A0A0B4J262 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC17.63■□□□□ 0.41
TRAV8-6A0A0B4J262 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC17.63■□□□□ 0.41
TRAV8-6A0A0B4J262 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC17.63■□□□□ 0.41
TRAV8-6A0A0B4J262 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRAV8-6A0A0B4J262 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
TRAV8-6A0A0B4J262 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRAV8-6A0A0B4J262 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC17.62■□□□□ 0.41
TRAV8-6A0A0B4J262 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
TRAV8-6A0A0B4J262 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC17.62■□□□□ 0.41
TRAV8-6A0A0B4J262 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRAV8-6A0A0B4J262 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
TRAV8-6A0A0B4J262 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
TRAV8-6A0A0B4J262 HGH1-207ENST00000628266 258 ntTSL 5 BASIC17.62■□□□□ 0.41
TRAV8-6A0A0B4J262 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
TRAV8-6A0A0B4J262 MEST-211ENST00000437945 1455 ntTSL 5 BASIC17.62■□□□□ 0.41
TRAV8-6A0A0B4J262 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
TRAV8-6A0A0B4J262 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TRAV8-6A0A0B4J262 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC17.62■□□□□ 0.41
TRAV8-6A0A0B4J262 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRAV8-6A0A0B4J262 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRAV8-6A0A0B4J262 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRAV8-6A0A0B4J262 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRAV8-6A0A0B4J262 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRAV8-6A0A0B4J262 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRAV8-6A0A0B4J262 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRAV8-6A0A0B4J262 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRAV8-6A0A0B4J262 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRAV8-6A0A0B4J262 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
TRAV8-6A0A0B4J262 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRAV8-6A0A0B4J262 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRAV8-6A0A0B4J262 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRAV8-6A0A0B4J262 AC135983.2-203ENST00000454486 1613 ntBASIC17.61■□□□□ 0.41
TRAV8-6A0A0B4J262 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRAV8-6A0A0B4J262 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRAV8-6A0A0B4J262 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRAV8-6A0A0B4J262 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRAV8-6A0A0B4J262 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC17.6■□□□□ 0.41
TRAV8-6A0A0B4J262 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC17.6■□□□□ 0.41
TRAV8-6A0A0B4J262 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRAV8-6A0A0B4J262 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRAV8-6A0A0B4J262 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC17.6■□□□□ 0.41
TRAV8-6A0A0B4J262 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
TRAV8-6A0A0B4J262 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRAV8-6A0A0B4J262 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 10.7 ms