Protein–RNA interactions for Protein: A0A0B4J1Z2

IGKV1D-43, Immunoglobulin kappa variable 1D-43, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV1D-43A0A0B4J1Z2 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
IGKV1D-43A0A0B4J1Z2 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
IGKV1D-43A0A0B4J1Z2 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC21.6■■□□□ 1.05
IGKV1D-43A0A0B4J1Z2 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
IGKV1D-43A0A0B4J1Z2 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
IGKV1D-43A0A0B4J1Z2 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
IGKV1D-43A0A0B4J1Z2 AL157400.5-201ENST00000507624 621 ntBASIC21.6■■□□□ 1.05
IGKV1D-43A0A0B4J1Z2 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC21.6■■□□□ 1.05
IGKV1D-43A0A0B4J1Z2 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC21.6■■□□□ 1.05
IGKV1D-43A0A0B4J1Z2 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC21.6■■□□□ 1.05
IGKV1D-43A0A0B4J1Z2 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
IGKV1D-43A0A0B4J1Z2 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
IGKV1D-43A0A0B4J1Z2 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
IGKV1D-43A0A0B4J1Z2 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
IGKV1D-43A0A0B4J1Z2 AC060814.1-201ENST00000554326 538 ntBASIC21.59■■□□□ 1.05
IGKV1D-43A0A0B4J1Z2 SRP68-213ENST00000629930 165 ntTSL 5 BASIC21.59■■□□□ 1.05
IGKV1D-43A0A0B4J1Z2 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
IGKV1D-43A0A0B4J1Z2 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC21.59■■□□□ 1.05
IGKV1D-43A0A0B4J1Z2 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
IGKV1D-43A0A0B4J1Z2 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
IGKV1D-43A0A0B4J1Z2 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
IGKV1D-43A0A0B4J1Z2 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
IGKV1D-43A0A0B4J1Z2 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
IGKV1D-43A0A0B4J1Z2 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC21.57■■□□□ 1.04
IGKV1D-43A0A0B4J1Z2 MOB2-207ENST00000614710 705 ntTSL 5 BASIC21.57■■□□□ 1.04
IGKV1D-43A0A0B4J1Z2 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
IGKV1D-43A0A0B4J1Z2 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC21.57■■□□□ 1.04
IGKV1D-43A0A0B4J1Z2 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
IGKV1D-43A0A0B4J1Z2 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
IGKV1D-43A0A0B4J1Z2 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC21.57■■□□□ 1.04
IGKV1D-43A0A0B4J1Z2 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
IGKV1D-43A0A0B4J1Z2 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
IGKV1D-43A0A0B4J1Z2 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
IGKV1D-43A0A0B4J1Z2 TPT1-202ENST00000379055 948 ntTSL 2 BASIC21.56■■□□□ 1.04
IGKV1D-43A0A0B4J1Z2 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
IGKV1D-43A0A0B4J1Z2 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC21.56■■□□□ 1.04
IGKV1D-43A0A0B4J1Z2 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
IGKV1D-43A0A0B4J1Z2 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
IGKV1D-43A0A0B4J1Z2 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC21.56■■□□□ 1.04
IGKV1D-43A0A0B4J1Z2 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
IGKV1D-43A0A0B4J1Z2 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
IGKV1D-43A0A0B4J1Z2 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
IGKV1D-43A0A0B4J1Z2 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
IGKV1D-43A0A0B4J1Z2 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC21.55■■□□□ 1.04
IGKV1D-43A0A0B4J1Z2 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC21.55■■□□□ 1.04
IGKV1D-43A0A0B4J1Z2 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
IGKV1D-43A0A0B4J1Z2 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
IGKV1D-43A0A0B4J1Z2 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC21.55■■□□□ 1.04
IGKV1D-43A0A0B4J1Z2 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
IGKV1D-43A0A0B4J1Z2 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
IGKV1D-43A0A0B4J1Z2 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
IGKV1D-43A0A0B4J1Z2 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
IGKV1D-43A0A0B4J1Z2 MIR4449-201ENST00000578365 66 ntBASIC21.54■■□□□ 1.04
IGKV1D-43A0A0B4J1Z2 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC21.53■■□□□ 1.04
IGKV1D-43A0A0B4J1Z2 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
IGKV1D-43A0A0B4J1Z2 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
IGKV1D-43A0A0B4J1Z2 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
IGKV1D-43A0A0B4J1Z2 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
IGKV1D-43A0A0B4J1Z2 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
IGKV1D-43A0A0B4J1Z2 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC21.53■■□□□ 1.04
IGKV1D-43A0A0B4J1Z2 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC21.53■■□□□ 1.04
IGKV1D-43A0A0B4J1Z2 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
IGKV1D-43A0A0B4J1Z2 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
IGKV1D-43A0A0B4J1Z2 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
IGKV1D-43A0A0B4J1Z2 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
IGKV1D-43A0A0B4J1Z2 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
IGKV1D-43A0A0B4J1Z2 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
IGKV1D-43A0A0B4J1Z2 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC21.52■■□□□ 1.04
IGKV1D-43A0A0B4J1Z2 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
IGKV1D-43A0A0B4J1Z2 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
IGKV1D-43A0A0B4J1Z2 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC21.52■■□□□ 1.04
IGKV1D-43A0A0B4J1Z2 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC21.52■■□□□ 1.03
IGKV1D-43A0A0B4J1Z2 AC010501.1-201ENST00000606270 1962 ntBASIC21.51■■□□□ 1.03
IGKV1D-43A0A0B4J1Z2 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
IGKV1D-43A0A0B4J1Z2 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
IGKV1D-43A0A0B4J1Z2 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
IGKV1D-43A0A0B4J1Z2 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
IGKV1D-43A0A0B4J1Z2 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
IGKV1D-43A0A0B4J1Z2 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
IGKV1D-43A0A0B4J1Z2 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
IGKV1D-43A0A0B4J1Z2 AC092296.2-201ENST00000589470 999 ntBASIC21.49■■□□□ 1.03
IGKV1D-43A0A0B4J1Z2 AC022413.1-201ENST00000624602 984 ntBASIC21.49■■□□□ 1.03
IGKV1D-43A0A0B4J1Z2 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
IGKV1D-43A0A0B4J1Z2 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
IGKV1D-43A0A0B4J1Z2 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
IGKV1D-43A0A0B4J1Z2 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
IGKV1D-43A0A0B4J1Z2 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
IGKV1D-43A0A0B4J1Z2 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
IGKV1D-43A0A0B4J1Z2 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
IGKV1D-43A0A0B4J1Z2 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC21.48■■□□□ 1.03
IGKV1D-43A0A0B4J1Z2 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
IGKV1D-43A0A0B4J1Z2 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
IGKV1D-43A0A0B4J1Z2 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
IGKV1D-43A0A0B4J1Z2 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC21.47■■□□□ 1.03
IGKV1D-43A0A0B4J1Z2 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC21.47■■□□□ 1.03
IGKV1D-43A0A0B4J1Z2 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
IGKV1D-43A0A0B4J1Z2 AC025884.2-201ENST00000553429 711 ntBASIC21.47■■□□□ 1.03
IGKV1D-43A0A0B4J1Z2 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
IGKV1D-43A0A0B4J1Z2 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC21.47■■□□□ 1.03
IGKV1D-43A0A0B4J1Z2 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC21.47■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms