Protein–RNA interactions for Protein: A0A075B6T7

TRAV6, T-cell receptor alpha variable 6 (Fragment), humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV6A0A075B6T7 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRAV6A0A075B6T7 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRAV6A0A075B6T7 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC20.77■□□□□ 0.92
TRAV6A0A075B6T7 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TRAV6A0A075B6T7 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRAV6A0A075B6T7 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRAV6A0A075B6T7 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.91
TRAV6A0A075B6T7 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
TRAV6A0A075B6T7 AC079834.2-201ENST00000609776 1949 ntBASIC20.76■□□□□ 0.91
TRAV6A0A075B6T7 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRAV6A0A075B6T7 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRAV6A0A075B6T7 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC20.76■□□□□ 0.91
TRAV6A0A075B6T7 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TRAV6A0A075B6T7 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TRAV6A0A075B6T7 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRAV6A0A075B6T7 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TRAV6A0A075B6T7 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
TRAV6A0A075B6T7 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRAV6A0A075B6T7 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRAV6A0A075B6T7 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRAV6A0A075B6T7 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
TRAV6A0A075B6T7 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
TRAV6A0A075B6T7 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC20.74■□□□□ 0.91
TRAV6A0A075B6T7 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRAV6A0A075B6T7 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TRAV6A0A075B6T7 AC010501.1-201ENST00000606270 1962 ntBASIC20.74■□□□□ 0.91
TRAV6A0A075B6T7 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
TRAV6A0A075B6T7 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRAV6A0A075B6T7 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRAV6A0A075B6T7 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC20.73■□□□□ 0.91
TRAV6A0A075B6T7 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC20.73■□□□□ 0.91
TRAV6A0A075B6T7 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
TRAV6A0A075B6T7 LINC00543-201ENST00000567234 1845 ntBASIC20.72■□□□□ 0.91
TRAV6A0A075B6T7 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TRAV6A0A075B6T7 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRAV6A0A075B6T7 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TRAV6A0A075B6T7 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC20.72■□□□□ 0.91
TRAV6A0A075B6T7 CLDN5-201ENST00000403084 2357 ntBASIC20.72■□□□□ 0.91
TRAV6A0A075B6T7 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC20.72■□□□□ 0.91
TRAV6A0A075B6T7 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRAV6A0A075B6T7 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.72■□□□□ 0.91
TRAV6A0A075B6T7 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRAV6A0A075B6T7 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TRAV6A0A075B6T7 AC142472.1-201ENST00000612013 1741 ntBASIC20.71■□□□□ 0.91
TRAV6A0A075B6T7 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC20.71■□□□□ 0.91
TRAV6A0A075B6T7 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.71■□□□□ 0.91
TRAV6A0A075B6T7 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRAV6A0A075B6T7 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRAV6A0A075B6T7 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC20.7■□□□□ 0.9
TRAV6A0A075B6T7 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TRAV6A0A075B6T7 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRAV6A0A075B6T7 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRAV6A0A075B6T7 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRAV6A0A075B6T7 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRAV6A0A075B6T7 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC20.69■□□□□ 0.9
TRAV6A0A075B6T7 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRAV6A0A075B6T7 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRAV6A0A075B6T7 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRAV6A0A075B6T7 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRAV6A0A075B6T7 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
TRAV6A0A075B6T7 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
TRAV6A0A075B6T7 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRAV6A0A075B6T7 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
TRAV6A0A075B6T7 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRAV6A0A075B6T7 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
TRAV6A0A075B6T7 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRAV6A0A075B6T7 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC20.67■□□□□ 0.9
TRAV6A0A075B6T7 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRAV6A0A075B6T7 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRAV6A0A075B6T7 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TRAV6A0A075B6T7 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC20.66■□□□□ 0.9
TRAV6A0A075B6T7 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
TRAV6A0A075B6T7 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRAV6A0A075B6T7 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
TRAV6A0A075B6T7 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRAV6A0A075B6T7 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TRAV6A0A075B6T7 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC20.65■□□□□ 0.9
TRAV6A0A075B6T7 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC20.65■□□□□ 0.9
TRAV6A0A075B6T7 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRAV6A0A075B6T7 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRAV6A0A075B6T7 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRAV6A0A075B6T7 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRAV6A0A075B6T7 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRAV6A0A075B6T7 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRAV6A0A075B6T7 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC20.64■□□□□ 0.9
TRAV6A0A075B6T7 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
TRAV6A0A075B6T7 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
TRAV6A0A075B6T7 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC20.64■□□□□ 0.89
TRAV6A0A075B6T7 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRAV6A0A075B6T7 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRAV6A0A075B6T7 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC20.64■□□□□ 0.89
TRAV6A0A075B6T7 KLF16-203ENST00000592313 508 ntTSL 3 BASIC20.64■□□□□ 0.89
TRAV6A0A075B6T7 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRAV6A0A075B6T7 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC20.64■□□□□ 0.89
TRAV6A0A075B6T7 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRAV6A0A075B6T7 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TRAV6A0A075B6T7 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TRAV6A0A075B6T7 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRAV6A0A075B6T7 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
TRAV6A0A075B6T7 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms