Protein–RNA interactions for Protein: Q9Y663

HS3ST3A1, Heparan sulfate glucosamine 3-O-sulfotransferase 3A1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HS3ST3A1Q9Y663 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HS3ST3A1Q9Y663 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC17.09■□□□□ 0.33
HS3ST3A1Q9Y663 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
HS3ST3A1Q9Y663 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HS3ST3A1Q9Y663 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
HS3ST3A1Q9Y663 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HS3ST3A1Q9Y663 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HS3ST3A1Q9Y663 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
HS3ST3A1Q9Y663 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
HS3ST3A1Q9Y663 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
HS3ST3A1Q9Y663 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HS3ST3A1Q9Y663 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HS3ST3A1Q9Y663 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
HS3ST3A1Q9Y663 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HS3ST3A1Q9Y663 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HS3ST3A1Q9Y663 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC17.09■□□□□ 0.33
HS3ST3A1Q9Y663 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC17.09■□□□□ 0.33
HS3ST3A1Q9Y663 AC004967.1-201ENST00000453589 447 ntBASIC17.09■□□□□ 0.33
HS3ST3A1Q9Y663 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC17.09■□□□□ 0.33
HS3ST3A1Q9Y663 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC17.09■□□□□ 0.33
HS3ST3A1Q9Y663 TK1-204ENST00000590430 683 ntTSL 3 BASIC17.09■□□□□ 0.33
HS3ST3A1Q9Y663 AP001160.2-201ENST00000596071 487 ntBASIC17.09■□□□□ 0.33
HS3ST3A1Q9Y663 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HS3ST3A1Q9Y663 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HS3ST3A1Q9Y663 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HS3ST3A1Q9Y663 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HS3ST3A1Q9Y663 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HS3ST3A1Q9Y663 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HS3ST3A1Q9Y663 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
HS3ST3A1Q9Y663 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HS3ST3A1Q9Y663 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HS3ST3A1Q9Y663 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HS3ST3A1Q9Y663 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HS3ST3A1Q9Y663 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HS3ST3A1Q9Y663 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
HS3ST3A1Q9Y663 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HS3ST3A1Q9Y663 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
HS3ST3A1Q9Y663 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
HS3ST3A1Q9Y663 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
HS3ST3A1Q9Y663 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
HS3ST3A1Q9Y663 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC17.08■□□□□ 0.33
HS3ST3A1Q9Y663 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
HS3ST3A1Q9Y663 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
HS3ST3A1Q9Y663 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
HS3ST3A1Q9Y663 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
HS3ST3A1Q9Y663 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC17.08■□□□□ 0.33
HS3ST3A1Q9Y663 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
HS3ST3A1Q9Y663 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HS3ST3A1Q9Y663 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC17.08■□□□□ 0.32
HS3ST3A1Q9Y663 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC17.08■□□□□ 0.32
HS3ST3A1Q9Y663 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC17.08■□□□□ 0.32
HS3ST3A1Q9Y663 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
HS3ST3A1Q9Y663 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
HS3ST3A1Q9Y663 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC17.08■□□□□ 0.32
HS3ST3A1Q9Y663 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC17.08■□□□□ 0.32
HS3ST3A1Q9Y663 AC211486.1-202ENST00000416371 468 ntBASIC17.08■□□□□ 0.32
HS3ST3A1Q9Y663 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC17.08■□□□□ 0.32
HS3ST3A1Q9Y663 AC211476.1-201ENST00000503899 468 ntBASIC17.08■□□□□ 0.32
HS3ST3A1Q9Y663 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC17.08■□□□□ 0.32
HS3ST3A1Q9Y663 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC17.08■□□□□ 0.32
HS3ST3A1Q9Y663 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC17.08■□□□□ 0.32
HS3ST3A1Q9Y663 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
HS3ST3A1Q9Y663 AQP6-205ENST00000618286 829 ntTSL 5 BASIC17.08■□□□□ 0.32
HS3ST3A1Q9Y663 C20orf181-201ENST00000623918 480 ntBASIC17.08■□□□□ 0.32
HS3ST3A1Q9Y663 AC007064.4-201ENST00000637740 555 ntBASIC17.08■□□□□ 0.32
HS3ST3A1Q9Y663 AC134684.3-201ENST00000641758 218 ntBASIC17.08■□□□□ 0.32
HS3ST3A1Q9Y663 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
HS3ST3A1Q9Y663 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HS3ST3A1Q9Y663 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HS3ST3A1Q9Y663 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HS3ST3A1Q9Y663 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC17.08■□□□□ 0.32
HS3ST3A1Q9Y663 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC17.08■□□□□ 0.32
HS3ST3A1Q9Y663 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.32
HS3ST3A1Q9Y663 AC006116.8-202ENST00000587620 1550 ntBASIC17.07■□□□□ 0.32
HS3ST3A1Q9Y663 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HS3ST3A1Q9Y663 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HS3ST3A1Q9Y663 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
HS3ST3A1Q9Y663 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
HS3ST3A1Q9Y663 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
HS3ST3A1Q9Y663 YBX1P5-201ENST00000509441 847 ntBASIC17.07■□□□□ 0.32
HS3ST3A1Q9Y663 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
HS3ST3A1Q9Y663 AL513190.1-201ENST00000621254 727 ntBASIC17.07■□□□□ 0.32
HS3ST3A1Q9Y663 AC004877.2-201ENST00000623941 599 ntBASIC17.07■□□□□ 0.32
HS3ST3A1Q9Y663 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HS3ST3A1Q9Y663 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC17.07■□□□□ 0.32
HS3ST3A1Q9Y663 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
HS3ST3A1Q9Y663 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC17.07■□□□□ 0.32
HS3ST3A1Q9Y663 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HS3ST3A1Q9Y663 AL354751.1-201ENST00000412768 1863 ntBASIC17.07■□□□□ 0.32
HS3ST3A1Q9Y663 LINC00304-203ENST00000565008 1864 ntBASIC17.07■□□□□ 0.32
HS3ST3A1Q9Y663 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC17.07■□□□□ 0.32
HS3ST3A1Q9Y663 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC17.07■□□□□ 0.32
HS3ST3A1Q9Y663 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
HS3ST3A1Q9Y663 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HS3ST3A1Q9Y663 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
HS3ST3A1Q9Y663 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
HS3ST3A1Q9Y663 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
HS3ST3A1Q9Y663 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.06■□□□□ 0.32
HS3ST3A1Q9Y663 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
HS3ST3A1Q9Y663 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms