Protein–RNA interactions for Protein: Q9Y282

ERGIC3, Endoplasmic reticulum-Golgi intermediate compartment protein 3, humanhuman

Predictions only

Length 383 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3Q9Y282 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
ERGIC3Q9Y282 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
ERGIC3Q9Y282 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
ERGIC3Q9Y282 AP003097.1-201ENST00000530657 1135 ntBASIC16.04■□□□□ 0.16
ERGIC3Q9Y282 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC16.04■□□□□ 0.16
ERGIC3Q9Y282 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC16.04■□□□□ 0.16
ERGIC3Q9Y282 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC16.04■□□□□ 0.16
ERGIC3Q9Y282 AC110285.5-201ENST00000611501 352 ntBASIC16.04■□□□□ 0.16
ERGIC3Q9Y282 CR392000.1-201ENST00000624770 1228 ntBASIC16.04■□□□□ 0.16
ERGIC3Q9Y282 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
ERGIC3Q9Y282 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ERGIC3Q9Y282 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
ERGIC3Q9Y282 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC16.04■□□□□ 0.16
ERGIC3Q9Y282 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ERGIC3Q9Y282 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ERGIC3Q9Y282 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC16.04■□□□□ 0.16
ERGIC3Q9Y282 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
ERGIC3Q9Y282 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ERGIC3Q9Y282 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ERGIC3Q9Y282 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC16.04■□□□□ 0.16
ERGIC3Q9Y282 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
ERGIC3Q9Y282 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
ERGIC3Q9Y282 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC16.04■□□□□ 0.16
ERGIC3Q9Y282 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC16.03■□□□□ 0.16
ERGIC3Q9Y282 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
ERGIC3Q9Y282 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC16.03■□□□□ 0.16
ERGIC3Q9Y282 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
ERGIC3Q9Y282 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
ERGIC3Q9Y282 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ERGIC3Q9Y282 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC16.03■□□□□ 0.16
ERGIC3Q9Y282 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ERGIC3Q9Y282 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
ERGIC3Q9Y282 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
ERGIC3Q9Y282 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC16.03■□□□□ 0.16
ERGIC3Q9Y282 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
ERGIC3Q9Y282 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ERGIC3Q9Y282 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
ERGIC3Q9Y282 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
ERGIC3Q9Y282 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ERGIC3Q9Y282 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC16.03■□□□□ 0.16
ERGIC3Q9Y282 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
ERGIC3Q9Y282 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
ERGIC3Q9Y282 AL353807.1-201ENST00000427475 662 ntBASIC16.03■□□□□ 0.16
ERGIC3Q9Y282 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC16.03■□□□□ 0.16
ERGIC3Q9Y282 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC16.03■□□□□ 0.16
ERGIC3Q9Y282 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC16.03■□□□□ 0.16
ERGIC3Q9Y282 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
ERGIC3Q9Y282 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
ERGIC3Q9Y282 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
ERGIC3Q9Y282 AC116407.2-201ENST00000613639 860 ntBASIC16.03■□□□□ 0.16
ERGIC3Q9Y282 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
ERGIC3Q9Y282 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC16.03■□□□□ 0.16
ERGIC3Q9Y282 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC16.03■□□□□ 0.16
ERGIC3Q9Y282 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ERGIC3Q9Y282 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
ERGIC3Q9Y282 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC16.03■□□□□ 0.16
ERGIC3Q9Y282 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ERGIC3Q9Y282 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ERGIC3Q9Y282 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ERGIC3Q9Y282 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
ERGIC3Q9Y282 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
ERGIC3Q9Y282 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
ERGIC3Q9Y282 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
ERGIC3Q9Y282 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
ERGIC3Q9Y282 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
ERGIC3Q9Y282 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC16.03■□□□□ 0.16
ERGIC3Q9Y282 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ERGIC3Q9Y282 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ERGIC3Q9Y282 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC16.02■□□□□ 0.16
ERGIC3Q9Y282 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
ERGIC3Q9Y282 LINC02228-204ENST00000642115 2962 ntBASIC16.02■□□□□ 0.16
ERGIC3Q9Y282 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
ERGIC3Q9Y282 TSPY26P-202ENST00000565928 3884 ntBASIC16.02■□□□□ 0.16
ERGIC3Q9Y282 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
ERGIC3Q9Y282 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ERGIC3Q9Y282 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC16.02■□□□□ 0.16
ERGIC3Q9Y282 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
ERGIC3Q9Y282 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC16.02■□□□□ 0.16
ERGIC3Q9Y282 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
ERGIC3Q9Y282 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC16.02■□□□□ 0.16
ERGIC3Q9Y282 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
ERGIC3Q9Y282 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
ERGIC3Q9Y282 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ERGIC3Q9Y282 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
ERGIC3Q9Y282 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ERGIC3Q9Y282 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
ERGIC3Q9Y282 KRT18P23-201ENST00000435622 1283 ntBASIC16.02■□□□□ 0.16
ERGIC3Q9Y282 MAP2K4P1-201ENST00000438453 1195 ntBASIC16.02■□□□□ 0.16
ERGIC3Q9Y282 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC16.02■□□□□ 0.16
ERGIC3Q9Y282 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC16.02■□□□□ 0.16
ERGIC3Q9Y282 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC16.02■□□□□ 0.16
ERGIC3Q9Y282 MIR6786-201ENST00000616843 113 ntBASIC16.02■□□□□ 0.16
ERGIC3Q9Y282 CABP2-204ENST00000636477 941 ntTSL 5 BASIC16.02■□□□□ 0.16
ERGIC3Q9Y282 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
ERGIC3Q9Y282 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
ERGIC3Q9Y282 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC16.02■□□□□ 0.15
ERGIC3Q9Y282 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC16.02■□□□□ 0.15
ERGIC3Q9Y282 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.15
ERGIC3Q9Y282 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
ERGIC3Q9Y282 AC024909.3-201ENST00000611513 2257 ntBASIC16.02■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms