Protein–RNA interactions for Protein: Q9UBP0

SPAST, Spastin, humanhuman

Predictions only

Length 616 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPASTQ9UBP0 SLC25A1P1-201ENST00000528351 927 ntBASIC17.47■□□□□ 0.39
SPASTQ9UBP0 SART3-203ENST00000546611 1184 ntBASIC17.47■□□□□ 0.39
SPASTQ9UBP0 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC17.47■□□□□ 0.39
SPASTQ9UBP0 AL049840.3-201ENST00000602669 611 ntBASIC17.47■□□□□ 0.39
SPASTQ9UBP0 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
SPASTQ9UBP0 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC17.47■□□□□ 0.39
SPASTQ9UBP0 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SPASTQ9UBP0 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC17.47■□□□□ 0.39
SPASTQ9UBP0 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.47■□□□□ 0.39
SPASTQ9UBP0 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SPASTQ9UBP0 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC17.47■□□□□ 0.39
SPASTQ9UBP0 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
SPASTQ9UBP0 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
SPASTQ9UBP0 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
SPASTQ9UBP0 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.47■□□□□ 0.39
SPASTQ9UBP0 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SPASTQ9UBP0 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
SPASTQ9UBP0 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SPASTQ9UBP0 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SPASTQ9UBP0 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC17.47■□□□□ 0.39
SPASTQ9UBP0 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC17.47■□□□□ 0.39
SPASTQ9UBP0 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SPASTQ9UBP0 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SPASTQ9UBP0 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SPASTQ9UBP0 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SPASTQ9UBP0 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SPASTQ9UBP0 AC093010.1-201ENST00000473625 1624 ntBASIC17.47■□□□□ 0.39
SPASTQ9UBP0 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
SPASTQ9UBP0 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.46■□□□□ 0.39
SPASTQ9UBP0 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SPASTQ9UBP0 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SPASTQ9UBP0 FLYWCH1P1-201ENST00000460917 1874 ntBASIC17.46■□□□□ 0.39
SPASTQ9UBP0 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC17.46■□□□□ 0.39
SPASTQ9UBP0 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SPASTQ9UBP0 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
SPASTQ9UBP0 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.46■□□□□ 0.39
SPASTQ9UBP0 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SPASTQ9UBP0 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
SPASTQ9UBP0 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
SPASTQ9UBP0 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SPASTQ9UBP0 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC17.46■□□□□ 0.39
SPASTQ9UBP0 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC17.46■□□□□ 0.39
SPASTQ9UBP0 MIR574-201ENST00000385209 96 ntBASIC17.46■□□□□ 0.39
SPASTQ9UBP0 AC096633.1-201ENST00000422446 749 ntBASIC17.46■□□□□ 0.39
SPASTQ9UBP0 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC17.46■□□□□ 0.39
SPASTQ9UBP0 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC17.46■□□□□ 0.39
SPASTQ9UBP0 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC17.46■□□□□ 0.39
SPASTQ9UBP0 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC17.46■□□□□ 0.39
SPASTQ9UBP0 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SPASTQ9UBP0 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
SPASTQ9UBP0 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC17.46■□□□□ 0.39
SPASTQ9UBP0 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC17.46■□□□□ 0.39
SPASTQ9UBP0 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
SPASTQ9UBP0 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
SPASTQ9UBP0 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
SPASTQ9UBP0 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
SPASTQ9UBP0 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.38
SPASTQ9UBP0 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SPASTQ9UBP0 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
SPASTQ9UBP0 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SPASTQ9UBP0 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
SPASTQ9UBP0 REXO1L9P-201ENST00000604264 2108 ntBASIC17.45■□□□□ 0.38
SPASTQ9UBP0 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
SPASTQ9UBP0 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SPASTQ9UBP0 FZD10-202ENST00000539839 3282 ntBASIC17.45■□□□□ 0.38
SPASTQ9UBP0 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SPASTQ9UBP0 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
SPASTQ9UBP0 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
SPASTQ9UBP0 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SPASTQ9UBP0 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
SPASTQ9UBP0 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SPASTQ9UBP0 RAB17-203ENST00000409576 466 ntTSL 3 BASIC17.45■□□□□ 0.38
SPASTQ9UBP0 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC17.45■□□□□ 0.38
SPASTQ9UBP0 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
SPASTQ9UBP0 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC17.45■□□□□ 0.38
SPASTQ9UBP0 KRT18P58-201ENST00000527480 1120 ntBASIC17.45■□□□□ 0.38
SPASTQ9UBP0 AC106730.1-201ENST00000566722 1090 ntBASIC17.45■□□□□ 0.38
SPASTQ9UBP0 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC17.45■□□□□ 0.38
SPASTQ9UBP0 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC17.45■□□□□ 0.38
SPASTQ9UBP0 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
SPASTQ9UBP0 AL671883.3-201ENST00000603274 991 ntBASIC17.45■□□□□ 0.38
SPASTQ9UBP0 GPALPP1-207ENST00000611650 899 ntBASIC17.45■□□□□ 0.38
SPASTQ9UBP0 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
SPASTQ9UBP0 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SPASTQ9UBP0 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SPASTQ9UBP0 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
SPASTQ9UBP0 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.45■□□□□ 0.38
SPASTQ9UBP0 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SPASTQ9UBP0 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SPASTQ9UBP0 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SPASTQ9UBP0 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SPASTQ9UBP0 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SPASTQ9UBP0 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC17.45■□□□□ 0.38
SPASTQ9UBP0 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SPASTQ9UBP0 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
SPASTQ9UBP0 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
SPASTQ9UBP0 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.45■□□□□ 0.38
SPASTQ9UBP0 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SPASTQ9UBP0 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC17.44■□□□□ 0.38
SPASTQ9UBP0 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms