Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LIN7CQ9NUP9 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC14.6□□□□□ -0.07
LIN7CQ9NUP9 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
LIN7CQ9NUP9 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
LIN7CQ9NUP9 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
LIN7CQ9NUP9 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
LIN7CQ9NUP9 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LIN7CQ9NUP9 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
LIN7CQ9NUP9 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
LIN7CQ9NUP9 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LIN7CQ9NUP9 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC14.6□□□□□ -0.07
LIN7CQ9NUP9 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LIN7CQ9NUP9 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC14.6□□□□□ -0.07
LIN7CQ9NUP9 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC14.6□□□□□ -0.07
LIN7CQ9NUP9 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
LIN7CQ9NUP9 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC14.6□□□□□ -0.07
LIN7CQ9NUP9 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
LIN7CQ9NUP9 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC14.6□□□□□ -0.07
LIN7CQ9NUP9 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC14.6□□□□□ -0.07
LIN7CQ9NUP9 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC14.6□□□□□ -0.07
LIN7CQ9NUP9 AL136038.4-201ENST00000603606 1261 ntBASIC14.6□□□□□ -0.07
LIN7CQ9NUP9 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
LIN7CQ9NUP9 PBK-203ENST00000522944 1499 ntTSL 2 BASIC14.6□□□□□ -0.07
LIN7CQ9NUP9 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
LIN7CQ9NUP9 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
LIN7CQ9NUP9 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LIN7CQ9NUP9 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
LIN7CQ9NUP9 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
LIN7CQ9NUP9 AC022211.2-201ENST00000585075 2527 ntBASIC14.6□□□□□ -0.07
LIN7CQ9NUP9 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
LIN7CQ9NUP9 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC14.6□□□□□ -0.07
LIN7CQ9NUP9 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
LIN7CQ9NUP9 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC14.6□□□□□ -0.07
LIN7CQ9NUP9 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LIN7CQ9NUP9 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LIN7CQ9NUP9 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
LIN7CQ9NUP9 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
LIN7CQ9NUP9 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LIN7CQ9NUP9 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
LIN7CQ9NUP9 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LIN7CQ9NUP9 AC009949.1-201ENST00000623048 1830 ntBASIC14.59□□□□□ -0.07
LIN7CQ9NUP9 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
LIN7CQ9NUP9 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
LIN7CQ9NUP9 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LIN7CQ9NUP9 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LIN7CQ9NUP9 NKILA-202ENST00000614771 2598 ntBASIC14.59□□□□□ -0.07
LIN7CQ9NUP9 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
LIN7CQ9NUP9 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LIN7CQ9NUP9 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC14.59□□□□□ -0.07
LIN7CQ9NUP9 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC14.59□□□□□ -0.07
LIN7CQ9NUP9 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC14.59□□□□□ -0.07
LIN7CQ9NUP9 KRT18P38-201ENST00000449496 1282 ntBASIC14.59□□□□□ -0.07
LIN7CQ9NUP9 AL671277.2-201ENST00000458060 996 ntBASIC14.59□□□□□ -0.07
LIN7CQ9NUP9 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC14.59□□□□□ -0.07
LIN7CQ9NUP9 AC113404.2-201ENST00000507884 177 ntBASIC14.59□□□□□ -0.07
LIN7CQ9NUP9 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC14.59□□□□□ -0.07
LIN7CQ9NUP9 NTF6B-201ENST00000591913 560 ntBASIC14.59□□□□□ -0.07
LIN7CQ9NUP9 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LIN7CQ9NUP9 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LIN7CQ9NUP9 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LIN7CQ9NUP9 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
LIN7CQ9NUP9 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
LIN7CQ9NUP9 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
LIN7CQ9NUP9 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LIN7CQ9NUP9 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LIN7CQ9NUP9 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
LIN7CQ9NUP9 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC14.59□□□□□ -0.07
LIN7CQ9NUP9 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LIN7CQ9NUP9 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LIN7CQ9NUP9 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
LIN7CQ9NUP9 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
LIN7CQ9NUP9 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
LIN7CQ9NUP9 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
LIN7CQ9NUP9 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.07
LIN7CQ9NUP9 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
LIN7CQ9NUP9 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
LIN7CQ9NUP9 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.07
LIN7CQ9NUP9 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
LIN7CQ9NUP9 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC14.58□□□□□ -0.07
LIN7CQ9NUP9 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
LIN7CQ9NUP9 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
LIN7CQ9NUP9 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC14.58□□□□□ -0.07
LIN7CQ9NUP9 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
LIN7CQ9NUP9 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC14.58□□□□□ -0.08
LIN7CQ9NUP9 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
LIN7CQ9NUP9 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC14.58□□□□□ -0.08
LIN7CQ9NUP9 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
LIN7CQ9NUP9 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
LIN7CQ9NUP9 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC14.58□□□□□ -0.08
LIN7CQ9NUP9 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
LIN7CQ9NUP9 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
LIN7CQ9NUP9 GUK1-204ENST00000366721 689 ntTSL 3 BASIC14.58□□□□□ -0.08
LIN7CQ9NUP9 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC14.58□□□□□ -0.08
LIN7CQ9NUP9 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
LIN7CQ9NUP9 DAP-202ENST00000432074 1048 ntTSL 2 BASIC14.58□□□□□ -0.08
LIN7CQ9NUP9 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC14.58□□□□□ -0.08
LIN7CQ9NUP9 LY6E-213ENST00000522528 606 ntTSL 3 BASIC14.58□□□□□ -0.08
LIN7CQ9NUP9 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC14.58□□□□□ -0.08
LIN7CQ9NUP9 AC087388.1-201ENST00000571370 1112 ntBASIC14.58□□□□□ -0.08
LIN7CQ9NUP9 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms