Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 TLE1-202ENST00000376484 666 ntTSL 3 BASIC19.45■□□□□ 0.7
BLOC1S4Q9NUP1 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC19.45■□□□□ 0.7
BLOC1S4Q9NUP1 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC19.45■□□□□ 0.7
BLOC1S4Q9NUP1 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
BLOC1S4Q9NUP1 SRP19-202ENST00000445150 833 ntTSL 2 BASIC19.45■□□□□ 0.7
BLOC1S4Q9NUP1 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
BLOC1S4Q9NUP1 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC19.45■□□□□ 0.7
BLOC1S4Q9NUP1 KRT18P56-201ENST00000507275 550 ntBASIC19.45■□□□□ 0.7
BLOC1S4Q9NUP1 AC106795.1-205ENST00000512851 1056 ntBASIC19.45■□□□□ 0.7
BLOC1S4Q9NUP1 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
BLOC1S4Q9NUP1 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
BLOC1S4Q9NUP1 AC073592.4-201ENST00000623827 446 ntBASIC19.45■□□□□ 0.7
BLOC1S4Q9NUP1 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC19.45■□□□□ 0.7
BLOC1S4Q9NUP1 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
BLOC1S4Q9NUP1 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC19.45■□□□□ 0.7
BLOC1S4Q9NUP1 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
BLOC1S4Q9NUP1 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
BLOC1S4Q9NUP1 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
BLOC1S4Q9NUP1 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
BLOC1S4Q9NUP1 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
BLOC1S4Q9NUP1 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
BLOC1S4Q9NUP1 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC19.44■□□□□ 0.7
BLOC1S4Q9NUP1 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
BLOC1S4Q9NUP1 SIGLEC16-201ENST00000599858 1437 ntBASIC19.44■□□□□ 0.7
BLOC1S4Q9NUP1 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC19.44■□□□□ 0.7
BLOC1S4Q9NUP1 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
BLOC1S4Q9NUP1 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
BLOC1S4Q9NUP1 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
BLOC1S4Q9NUP1 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
BLOC1S4Q9NUP1 AKR1C7P-201ENST00000305623 895 ntBASIC19.44■□□□□ 0.7
BLOC1S4Q9NUP1 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
BLOC1S4Q9NUP1 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC19.44■□□□□ 0.7
BLOC1S4Q9NUP1 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC19.44■□□□□ 0.7
BLOC1S4Q9NUP1 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC19.44■□□□□ 0.7
BLOC1S4Q9NUP1 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC19.44■□□□□ 0.7
BLOC1S4Q9NUP1 PRELID1P1-202ENST00000567272 903 ntBASIC19.44■□□□□ 0.7
BLOC1S4Q9NUP1 AL121772.3-201ENST00000610840 674 ntBASIC19.44■□□□□ 0.7
BLOC1S4Q9NUP1 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
BLOC1S4Q9NUP1 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC19.44■□□□□ 0.7
BLOC1S4Q9NUP1 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC19.44■□□□□ 0.7
BLOC1S4Q9NUP1 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
BLOC1S4Q9NUP1 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
BLOC1S4Q9NUP1 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC19.44■□□□□ 0.7
BLOC1S4Q9NUP1 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC19.44■□□□□ 0.7
BLOC1S4Q9NUP1 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
BLOC1S4Q9NUP1 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
BLOC1S4Q9NUP1 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
BLOC1S4Q9NUP1 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
BLOC1S4Q9NUP1 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
BLOC1S4Q9NUP1 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
BLOC1S4Q9NUP1 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
BLOC1S4Q9NUP1 AC079776.2-201ENST00000641154 1609 ntBASIC19.43■□□□□ 0.7
BLOC1S4Q9NUP1 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
BLOC1S4Q9NUP1 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
BLOC1S4Q9NUP1 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
BLOC1S4Q9NUP1 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC19.43■□□□□ 0.7
BLOC1S4Q9NUP1 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
BLOC1S4Q9NUP1 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
BLOC1S4Q9NUP1 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
BLOC1S4Q9NUP1 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
BLOC1S4Q9NUP1 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
BLOC1S4Q9NUP1 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
BLOC1S4Q9NUP1 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
BLOC1S4Q9NUP1 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
BLOC1S4Q9NUP1 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
BLOC1S4Q9NUP1 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
BLOC1S4Q9NUP1 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
BLOC1S4Q9NUP1 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
BLOC1S4Q9NUP1 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
BLOC1S4Q9NUP1 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
BLOC1S4Q9NUP1 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC19.43■□□□□ 0.7
BLOC1S4Q9NUP1 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC19.43■□□□□ 0.7
BLOC1S4Q9NUP1 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
BLOC1S4Q9NUP1 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC19.43■□□□□ 0.7
BLOC1S4Q9NUP1 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
BLOC1S4Q9NUP1 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
BLOC1S4Q9NUP1 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
BLOC1S4Q9NUP1 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
BLOC1S4Q9NUP1 RHBDF1P1-201ENST00000427504 1941 ntBASIC19.43■□□□□ 0.7
BLOC1S4Q9NUP1 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
BLOC1S4Q9NUP1 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC19.43■□□□□ 0.7
BLOC1S4Q9NUP1 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
BLOC1S4Q9NUP1 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC19.42■□□□□ 0.7
BLOC1S4Q9NUP1 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
BLOC1S4Q9NUP1 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
BLOC1S4Q9NUP1 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC19.42■□□□□ 0.7
BLOC1S4Q9NUP1 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
BLOC1S4Q9NUP1 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
BLOC1S4Q9NUP1 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC19.42■□□□□ 0.7
BLOC1S4Q9NUP1 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
BLOC1S4Q9NUP1 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
BLOC1S4Q9NUP1 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
BLOC1S4Q9NUP1 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
BLOC1S4Q9NUP1 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
BLOC1S4Q9NUP1 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC19.42■□□□□ 0.7
BLOC1S4Q9NUP1 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
BLOC1S4Q9NUP1 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
BLOC1S4Q9NUP1 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
BLOC1S4Q9NUP1 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
BLOC1S4Q9NUP1 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms