Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC12.09□□□□□ -0.47
CDC42SE2Q9NRR3 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
CDC42SE2Q9NRR3 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
CDC42SE2Q9NRR3 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CDC42SE2Q9NRR3 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC12.09□□□□□ -0.47
CDC42SE2Q9NRR3 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
CDC42SE2Q9NRR3 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC12.09□□□□□ -0.47
CDC42SE2Q9NRR3 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC12.09□□□□□ -0.47
CDC42SE2Q9NRR3 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
CDC42SE2Q9NRR3 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CDC42SE2Q9NRR3 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CDC42SE2Q9NRR3 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC12.08□□□□□ -0.47
CDC42SE2Q9NRR3 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC12.08□□□□□ -0.47
CDC42SE2Q9NRR3 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.47
CDC42SE2Q9NRR3 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.47
CDC42SE2Q9NRR3 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CDC42SE2Q9NRR3 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
CDC42SE2Q9NRR3 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CDC42SE2Q9NRR3 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CDC42SE2Q9NRR3 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
CDC42SE2Q9NRR3 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC12.08□□□□□ -0.48
CDC42SE2Q9NRR3 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CDC42SE2Q9NRR3 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
CDC42SE2Q9NRR3 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CDC42SE2Q9NRR3 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC12.08□□□□□ -0.48
CDC42SE2Q9NRR3 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CDC42SE2Q9NRR3 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CDC42SE2Q9NRR3 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
CDC42SE2Q9NRR3 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC12.08□□□□□ -0.48
CDC42SE2Q9NRR3 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CDC42SE2Q9NRR3 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CDC42SE2Q9NRR3 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CDC42SE2Q9NRR3 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CDC42SE2Q9NRR3 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC12.08□□□□□ -0.48
CDC42SE2Q9NRR3 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CDC42SE2Q9NRR3 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.48
CDC42SE2Q9NRR3 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CDC42SE2Q9NRR3 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC12.08□□□□□ -0.48
CDC42SE2Q9NRR3 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC12.08□□□□□ -0.48
CDC42SE2Q9NRR3 TSPY15P-201ENST00000457163 923 ntBASIC12.08□□□□□ -0.48
CDC42SE2Q9NRR3 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CDC42SE2Q9NRR3 PPOX-214ENST00000535223 664 ntTSL 3 BASIC12.08□□□□□ -0.48
CDC42SE2Q9NRR3 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC12.08□□□□□ -0.48
CDC42SE2Q9NRR3 AC140113.3-201ENST00000605663 199 ntBASIC12.08□□□□□ -0.48
CDC42SE2Q9NRR3 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
CDC42SE2Q9NRR3 AC079602.3-201ENST00000623931 403 ntBASIC12.08□□□□□ -0.48
CDC42SE2Q9NRR3 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CDC42SE2Q9NRR3 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC12.08□□□□□ -0.48
CDC42SE2Q9NRR3 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CDC42SE2Q9NRR3 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CDC42SE2Q9NRR3 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CDC42SE2Q9NRR3 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC12.08□□□□□ -0.48
CDC42SE2Q9NRR3 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CDC42SE2Q9NRR3 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC12.08□□□□□ -0.48
CDC42SE2Q9NRR3 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC12.08□□□□□ -0.48
CDC42SE2Q9NRR3 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC12.08□□□□□ -0.48
CDC42SE2Q9NRR3 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CDC42SE2Q9NRR3 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
CDC42SE2Q9NRR3 KRT18P22-201ENST00000402024 1347 ntBASIC12.08□□□□□ -0.48
CDC42SE2Q9NRR3 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CDC42SE2Q9NRR3 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
CDC42SE2Q9NRR3 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CDC42SE2Q9NRR3 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CDC42SE2Q9NRR3 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CDC42SE2Q9NRR3 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC12.08□□□□□ -0.48
CDC42SE2Q9NRR3 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
CDC42SE2Q9NRR3 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
CDC42SE2Q9NRR3 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
CDC42SE2Q9NRR3 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CDC42SE2Q9NRR3 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CDC42SE2Q9NRR3 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC12.08□□□□□ -0.48
CDC42SE2Q9NRR3 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
CDC42SE2Q9NRR3 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CDC42SE2Q9NRR3 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CDC42SE2Q9NRR3 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CDC42SE2Q9NRR3 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC12.07□□□□□ -0.48
CDC42SE2Q9NRR3 LINC01568-207ENST00000641790 1380 ntBASIC12.07□□□□□ -0.48
CDC42SE2Q9NRR3 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CDC42SE2Q9NRR3 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC12.07□□□□□ -0.48
CDC42SE2Q9NRR3 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC12.07□□□□□ -0.48
CDC42SE2Q9NRR3 PCDHA14-201ENST00000506751 2298 ntBASIC12.07□□□□□ -0.48
CDC42SE2Q9NRR3 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CDC42SE2Q9NRR3 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC12.07□□□□□ -0.48
CDC42SE2Q9NRR3 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CDC42SE2Q9NRR3 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC12.07□□□□□ -0.48
CDC42SE2Q9NRR3 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CDC42SE2Q9NRR3 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CDC42SE2Q9NRR3 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC12.07□□□□□ -0.48
CDC42SE2Q9NRR3 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC12.07□□□□□ -0.48
CDC42SE2Q9NRR3 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CDC42SE2Q9NRR3 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
CDC42SE2Q9NRR3 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CDC42SE2Q9NRR3 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CDC42SE2Q9NRR3 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CDC42SE2Q9NRR3 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CDC42SE2Q9NRR3 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
CDC42SE2Q9NRR3 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC12.07□□□□□ -0.48
CDC42SE2Q9NRR3 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC12.07□□□□□ -0.48
CDC42SE2Q9NRR3 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC12.07□□□□□ -0.48
CDC42SE2Q9NRR3 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC12.07□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms