Protein–RNA interactions for Protein: Q9NP91

SLC6A20, Sodium- and chloride-dependent transporter XTRP3, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A20Q9NP91 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC6A20Q9NP91 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SLC6A20Q9NP91 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC6A20Q9NP91 LYSMD4-203ENST00000378904 2122 ntBASIC16.82■□□□□ 0.28
SLC6A20Q9NP91 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC6A20Q9NP91 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC6A20Q9NP91 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC16.82■□□□□ 0.28
SLC6A20Q9NP91 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC6A20Q9NP91 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC6A20Q9NP91 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC6A20Q9NP91 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC16.82■□□□□ 0.28
SLC6A20Q9NP91 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SLC6A20Q9NP91 PAN3-AS1-201ENST00000563843 1351 ntBASIC16.82■□□□□ 0.28
SLC6A20Q9NP91 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC16.82■□□□□ 0.28
SLC6A20Q9NP91 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC16.82■□□□□ 0.28
SLC6A20Q9NP91 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC16.82■□□□□ 0.28
SLC6A20Q9NP91 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
SLC6A20Q9NP91 STK19B-204ENST00000512515 211 ntBASIC16.82■□□□□ 0.28
SLC6A20Q9NP91 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC6A20Q9NP91 SART3-203ENST00000546611 1184 ntBASIC16.82■□□□□ 0.28
SLC6A20Q9NP91 SLC25A6P4-201ENST00000586535 553 ntBASIC16.82■□□□□ 0.28
SLC6A20Q9NP91 TK1-204ENST00000590430 683 ntTSL 3 BASIC16.82■□□□□ 0.28
SLC6A20Q9NP91 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC16.82■□□□□ 0.28
SLC6A20Q9NP91 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
SLC6A20Q9NP91 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC6A20Q9NP91 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC6A20Q9NP91 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC6A20Q9NP91 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC6A20Q9NP91 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
SLC6A20Q9NP91 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC6A20Q9NP91 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC6A20Q9NP91 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC6A20Q9NP91 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC6A20Q9NP91 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC6A20Q9NP91 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC16.82■□□□□ 0.28
SLC6A20Q9NP91 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC6A20Q9NP91 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC16.82■□□□□ 0.28
SLC6A20Q9NP91 AC020916.1-201ENST00000587762 1774 ntBASIC16.82■□□□□ 0.28
SLC6A20Q9NP91 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC6A20Q9NP91 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC16.81■□□□□ 0.28
SLC6A20Q9NP91 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
SLC6A20Q9NP91 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC16.81■□□□□ 0.28
SLC6A20Q9NP91 AC009336.1-201ENST00000608941 1553 ntBASIC16.81■□□□□ 0.28
SLC6A20Q9NP91 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC16.81■□□□□ 0.28
SLC6A20Q9NP91 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC6A20Q9NP91 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC16.81■□□□□ 0.28
SLC6A20Q9NP91 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC6A20Q9NP91 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC6A20Q9NP91 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SLC6A20Q9NP91 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC16.81■□□□□ 0.28
SLC6A20Q9NP91 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC6A20Q9NP91 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC6A20Q9NP91 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC6A20Q9NP91 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC16.81■□□□□ 0.28
SLC6A20Q9NP91 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC16.81■□□□□ 0.28
SLC6A20Q9NP91 BX005266.1-201ENST00000473402 457 ntBASIC16.81■□□□□ 0.28
SLC6A20Q9NP91 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
SLC6A20Q9NP91 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SLC6A20Q9NP91 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC16.81■□□□□ 0.28
SLC6A20Q9NP91 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SLC6A20Q9NP91 AC073592.4-201ENST00000623827 446 ntBASIC16.81■□□□□ 0.28
SLC6A20Q9NP91 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
SLC6A20Q9NP91 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC6A20Q9NP91 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC6A20Q9NP91 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC6A20Q9NP91 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SLC6A20Q9NP91 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC6A20Q9NP91 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC6A20Q9NP91 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
SLC6A20Q9NP91 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC16.81■□□□□ 0.28
SLC6A20Q9NP91 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC16.81■□□□□ 0.28
SLC6A20Q9NP91 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
SLC6A20Q9NP91 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC16.81■□□□□ 0.28
SLC6A20Q9NP91 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC6A20Q9NP91 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC6A20Q9NP91 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC6A20Q9NP91 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC6A20Q9NP91 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC6A20Q9NP91 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC16.8■□□□□ 0.28
SLC6A20Q9NP91 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC6A20Q9NP91 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
SLC6A20Q9NP91 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC16.8■□□□□ 0.28
SLC6A20Q9NP91 AL356309.3-201ENST00000624132 1934 ntBASIC16.8■□□□□ 0.28
SLC6A20Q9NP91 SIGLEC16-201ENST00000599858 1437 ntBASIC16.8■□□□□ 0.28
SLC6A20Q9NP91 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
SLC6A20Q9NP91 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
SLC6A20Q9NP91 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC6A20Q9NP91 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC6A20Q9NP91 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC6A20Q9NP91 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC16.8■□□□□ 0.28
SLC6A20Q9NP91 MRPL3P1-201ENST00000400109 1033 ntBASIC16.8■□□□□ 0.28
SLC6A20Q9NP91 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC16.8■□□□□ 0.28
SLC6A20Q9NP91 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
SLC6A20Q9NP91 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC16.8■□□□□ 0.28
SLC6A20Q9NP91 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SLC6A20Q9NP91 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC16.8■□□□□ 0.28
SLC6A20Q9NP91 AL662844.1-201ENST00000546340 181 ntBASIC16.8■□□□□ 0.28
SLC6A20Q9NP91 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
SLC6A20Q9NP91 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC16.8■□□□□ 0.28
SLC6A20Q9NP91 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 62.8 ms