Protein–RNA interactions for Protein: Q9H7F0

ATP13A3, Probable cation-transporting ATPase 13A3, humanhuman

Predictions only

Length 1,226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3Q9H7F0 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ATP13A3Q9H7F0 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ATP13A3Q9H7F0 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
ATP13A3Q9H7F0 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ATP13A3Q9H7F0 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ATP13A3Q9H7F0 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ATP13A3Q9H7F0 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC17.72■□□□□ 0.43
ATP13A3Q9H7F0 LINC00304-203ENST00000565008 1864 ntBASIC17.72■□□□□ 0.43
ATP13A3Q9H7F0 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC17.72■□□□□ 0.43
ATP13A3Q9H7F0 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ATP13A3Q9H7F0 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
ATP13A3Q9H7F0 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC17.72■□□□□ 0.43
ATP13A3Q9H7F0 KLF4P1-201ENST00000412782 1185 ntBASIC17.72■□□□□ 0.43
ATP13A3Q9H7F0 AC079781.3-201ENST00000449110 356 ntBASIC17.72■□□□□ 0.43
ATP13A3Q9H7F0 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ATP13A3Q9H7F0 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
ATP13A3Q9H7F0 AL139288.1-201ENST00000623748 933 ntBASIC17.72■□□□□ 0.43
ATP13A3Q9H7F0 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
ATP13A3Q9H7F0 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
ATP13A3Q9H7F0 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ATP13A3Q9H7F0 HLA-J-201ENST00000462773 1622 ntBASIC17.72■□□□□ 0.43
ATP13A3Q9H7F0 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
ATP13A3Q9H7F0 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
ATP13A3Q9H7F0 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ATP13A3Q9H7F0 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
ATP13A3Q9H7F0 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.71■□□□□ 0.43
ATP13A3Q9H7F0 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ATP13A3Q9H7F0 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ATP13A3Q9H7F0 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ATP13A3Q9H7F0 AC134043.2-201ENST00000624206 2238 ntBASIC17.71■□□□□ 0.43
ATP13A3Q9H7F0 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.71■□□□□ 0.43
ATP13A3Q9H7F0 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
ATP13A3Q9H7F0 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC17.71■□□□□ 0.43
ATP13A3Q9H7F0 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
ATP13A3Q9H7F0 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ATP13A3Q9H7F0 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
ATP13A3Q9H7F0 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ATP13A3Q9H7F0 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
ATP13A3Q9H7F0 AC132938.5-201ENST00000624980 1813 ntBASIC17.71■□□□□ 0.43
ATP13A3Q9H7F0 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ATP13A3Q9H7F0 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ATP13A3Q9H7F0 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC17.71■□□□□ 0.43
ATP13A3Q9H7F0 HIST2H3DP1-201ENST00000401004 416 ntBASIC17.71■□□□□ 0.43
ATP13A3Q9H7F0 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC17.71■□□□□ 0.43
ATP13A3Q9H7F0 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC17.71■□□□□ 0.43
ATP13A3Q9H7F0 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
ATP13A3Q9H7F0 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC17.71■□□□□ 0.43
ATP13A3Q9H7F0 STK25P1-201ENST00000585406 838 ntBASIC17.71■□□□□ 0.43
ATP13A3Q9H7F0 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC17.71■□□□□ 0.43
ATP13A3Q9H7F0 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
ATP13A3Q9H7F0 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC17.71■□□□□ 0.43
ATP13A3Q9H7F0 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
ATP13A3Q9H7F0 AL355312.1-201ENST00000407115 2176 ntBASIC17.71■□□□□ 0.43
ATP13A3Q9H7F0 AC079776.2-201ENST00000641154 1609 ntBASIC17.71■□□□□ 0.43
ATP13A3Q9H7F0 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC17.71■□□□□ 0.43
ATP13A3Q9H7F0 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
ATP13A3Q9H7F0 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
ATP13A3Q9H7F0 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.71■□□□□ 0.43
ATP13A3Q9H7F0 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
ATP13A3Q9H7F0 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC17.7■□□□□ 0.42
ATP13A3Q9H7F0 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ATP13A3Q9H7F0 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
ATP13A3Q9H7F0 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC17.7■□□□□ 0.42
ATP13A3Q9H7F0 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
ATP13A3Q9H7F0 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC17.7■□□□□ 0.42
ATP13A3Q9H7F0 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ATP13A3Q9H7F0 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ATP13A3Q9H7F0 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ATP13A3Q9H7F0 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ATP13A3Q9H7F0 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ATP13A3Q9H7F0 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ATP13A3Q9H7F0 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
ATP13A3Q9H7F0 SPDYE21P-201ENST00000413323 827 ntBASIC17.7■□□□□ 0.42
ATP13A3Q9H7F0 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
ATP13A3Q9H7F0 AL160237.2-201ENST00000556165 472 ntBASIC17.7■□□□□ 0.42
ATP13A3Q9H7F0 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC17.7■□□□□ 0.42
ATP13A3Q9H7F0 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ATP13A3Q9H7F0 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
ATP13A3Q9H7F0 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ATP13A3Q9H7F0 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ATP13A3Q9H7F0 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC17.7■□□□□ 0.42
ATP13A3Q9H7F0 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ATP13A3Q9H7F0 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
ATP13A3Q9H7F0 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ATP13A3Q9H7F0 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC17.7■□□□□ 0.42
ATP13A3Q9H7F0 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC17.7■□□□□ 0.42
ATP13A3Q9H7F0 AC133963.1-201ENST00000504166 1679 ntBASIC17.7■□□□□ 0.42
ATP13A3Q9H7F0 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ATP13A3Q9H7F0 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.7■□□□□ 0.42
ATP13A3Q9H7F0 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
ATP13A3Q9H7F0 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
ATP13A3Q9H7F0 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.7■□□□□ 0.42
ATP13A3Q9H7F0 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ATP13A3Q9H7F0 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ATP13A3Q9H7F0 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ATP13A3Q9H7F0 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.7■□□□□ 0.42
ATP13A3Q9H7F0 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
ATP13A3Q9H7F0 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC17.7■□□□□ 0.42
ATP13A3Q9H7F0 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
ATP13A3Q9H7F0 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms