Protein–RNA interactions for Protein: Q96DB2

HDAC11, Histone deacetylase 11, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11Q96DB2 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC18.06■□□□□ 0.48
HDAC11Q96DB2 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
HDAC11Q96DB2 TOB2P1-201ENST00000469761 992 ntBASIC18.06■□□□□ 0.48
HDAC11Q96DB2 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC18.06■□□□□ 0.48
HDAC11Q96DB2 MPI-205ENST00000562606 1052 ntTSL 3 BASIC18.06■□□□□ 0.48
HDAC11Q96DB2 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
HDAC11Q96DB2 BCL10-202ENST00000620248 774 ntTSL 5 BASIC18.06■□□□□ 0.48
HDAC11Q96DB2 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC18.06■□□□□ 0.48
HDAC11Q96DB2 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC18.06■□□□□ 0.48
HDAC11Q96DB2 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC18.06■□□□□ 0.48
HDAC11Q96DB2 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HDAC11Q96DB2 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
HDAC11Q96DB2 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HDAC11Q96DB2 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
HDAC11Q96DB2 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
HDAC11Q96DB2 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC18.05■□□□□ 0.48
HDAC11Q96DB2 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
HDAC11Q96DB2 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
HDAC11Q96DB2 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
HDAC11Q96DB2 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
HDAC11Q96DB2 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC18.05■□□□□ 0.48
HDAC11Q96DB2 AC020916.1-201ENST00000587762 1774 ntBASIC18.05■□□□□ 0.48
HDAC11Q96DB2 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HDAC11Q96DB2 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HDAC11Q96DB2 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HDAC11Q96DB2 FAM220CP-201ENST00000395253 831 ntBASIC18.05■□□□□ 0.48
HDAC11Q96DB2 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC18.05■□□□□ 0.48
HDAC11Q96DB2 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HDAC11Q96DB2 CDV3-207ENST00000508481 661 ntTSL 3 BASIC18.05■□□□□ 0.48
HDAC11Q96DB2 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC18.05■□□□□ 0.48
HDAC11Q96DB2 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
HDAC11Q96DB2 AC019129.2-201ENST00000609837 1235 ntBASIC18.05■□□□□ 0.48
HDAC11Q96DB2 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
HDAC11Q96DB2 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HDAC11Q96DB2 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC18.05■□□□□ 0.48
HDAC11Q96DB2 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HDAC11Q96DB2 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
HDAC11Q96DB2 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
HDAC11Q96DB2 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
HDAC11Q96DB2 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
HDAC11Q96DB2 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
HDAC11Q96DB2 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC18.05■□□□□ 0.48
HDAC11Q96DB2 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
HDAC11Q96DB2 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC18.04■□□□□ 0.48
HDAC11Q96DB2 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
HDAC11Q96DB2 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
HDAC11Q96DB2 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
HDAC11Q96DB2 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HDAC11Q96DB2 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
HDAC11Q96DB2 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC18.04■□□□□ 0.48
HDAC11Q96DB2 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HDAC11Q96DB2 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.04■□□□□ 0.48
HDAC11Q96DB2 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.04■□□□□ 0.48
HDAC11Q96DB2 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC18.04■□□□□ 0.48
HDAC11Q96DB2 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
HDAC11Q96DB2 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HDAC11Q96DB2 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HDAC11Q96DB2 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HDAC11Q96DB2 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC18.04■□□□□ 0.48
HDAC11Q96DB2 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC18.04■□□□□ 0.48
HDAC11Q96DB2 LINC00265-3P-201ENST00000447588 903 ntBASIC18.04■□□□□ 0.48
HDAC11Q96DB2 KRT17P6-201ENST00000453795 1220 ntBASIC18.04■□□□□ 0.48
HDAC11Q96DB2 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC18.04■□□□□ 0.48
HDAC11Q96DB2 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC18.04■□□□□ 0.48
HDAC11Q96DB2 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC18.04■□□□□ 0.48
HDAC11Q96DB2 IL11-204ENST00000590625 1028 ntTSL 2 BASIC18.04■□□□□ 0.48
HDAC11Q96DB2 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
HDAC11Q96DB2 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
HDAC11Q96DB2 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
HDAC11Q96DB2 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HDAC11Q96DB2 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
HDAC11Q96DB2 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
HDAC11Q96DB2 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
HDAC11Q96DB2 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC18.04■□□□□ 0.48
HDAC11Q96DB2 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HDAC11Q96DB2 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
HDAC11Q96DB2 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC18.04■□□□□ 0.48
HDAC11Q96DB2 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC18.04■□□□□ 0.48
HDAC11Q96DB2 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HDAC11Q96DB2 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HDAC11Q96DB2 AC139713.2-201ENST00000641328 2723 ntBASIC18.04■□□□□ 0.48
HDAC11Q96DB2 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HDAC11Q96DB2 SIRPAP1-201ENST00000448467 1770 ntBASIC18.04■□□□□ 0.48
HDAC11Q96DB2 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
HDAC11Q96DB2 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
HDAC11Q96DB2 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
HDAC11Q96DB2 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
HDAC11Q96DB2 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
HDAC11Q96DB2 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
HDAC11Q96DB2 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HDAC11Q96DB2 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HDAC11Q96DB2 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
HDAC11Q96DB2 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HDAC11Q96DB2 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
HDAC11Q96DB2 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC18.03■□□□□ 0.48
HDAC11Q96DB2 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC18.03■□□□□ 0.48
HDAC11Q96DB2 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
HDAC11Q96DB2 LYSMD4-203ENST00000378904 2122 ntBASIC18.03■□□□□ 0.48
HDAC11Q96DB2 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC18.03■□□□□ 0.48
HDAC11Q96DB2 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms