Protein–RNA interactions for Protein: Q96BD0

SLCO4A1, Solute carrier organic anion transporter family member 4A1, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLCO4A1Q96BD0 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SLCO4A1Q96BD0 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
SLCO4A1Q96BD0 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
SLCO4A1Q96BD0 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC16.42■□□□□ 0.22
SLCO4A1Q96BD0 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SLCO4A1Q96BD0 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC16.42■□□□□ 0.22
SLCO4A1Q96BD0 BX276092.7-203ENST00000637198 1536 ntBASIC16.42■□□□□ 0.22
SLCO4A1Q96BD0 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC16.42■□□□□ 0.22
SLCO4A1Q96BD0 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC16.42■□□□□ 0.22
SLCO4A1Q96BD0 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SLCO4A1Q96BD0 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC16.42■□□□□ 0.22
SLCO4A1Q96BD0 GRAP-204ENST00000573099 846 ntTSL 3 BASIC16.42■□□□□ 0.22
SLCO4A1Q96BD0 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC16.42■□□□□ 0.22
SLCO4A1Q96BD0 AP001412.1-201ENST00000608405 714 ntBASIC16.42■□□□□ 0.22
SLCO4A1Q96BD0 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
SLCO4A1Q96BD0 AL513477.1-201ENST00000602865 2407 ntBASIC16.42■□□□□ 0.22
SLCO4A1Q96BD0 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC16.42■□□□□ 0.22
SLCO4A1Q96BD0 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SLCO4A1Q96BD0 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SLCO4A1Q96BD0 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SLCO4A1Q96BD0 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
SLCO4A1Q96BD0 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
SLCO4A1Q96BD0 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SLCO4A1Q96BD0 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SLCO4A1Q96BD0 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
SLCO4A1Q96BD0 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SLCO4A1Q96BD0 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SLCO4A1Q96BD0 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
SLCO4A1Q96BD0 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SLCO4A1Q96BD0 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SLCO4A1Q96BD0 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
SLCO4A1Q96BD0 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC16.42■□□□□ 0.22
SLCO4A1Q96BD0 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
SLCO4A1Q96BD0 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SLCO4A1Q96BD0 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SLCO4A1Q96BD0 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC16.41■□□□□ 0.22
SLCO4A1Q96BD0 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SLCO4A1Q96BD0 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
SLCO4A1Q96BD0 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SLCO4A1Q96BD0 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC16.41■□□□□ 0.22
SLCO4A1Q96BD0 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
SLCO4A1Q96BD0 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
SLCO4A1Q96BD0 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC16.41■□□□□ 0.22
SLCO4A1Q96BD0 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC16.41■□□□□ 0.22
SLCO4A1Q96BD0 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SLCO4A1Q96BD0 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
SLCO4A1Q96BD0 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
SLCO4A1Q96BD0 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SLCO4A1Q96BD0 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
SLCO4A1Q96BD0 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SLCO4A1Q96BD0 BAALC-201ENST00000297574 801 ntTSL 3 BASIC16.41■□□□□ 0.22
SLCO4A1Q96BD0 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
SLCO4A1Q96BD0 PRR31-201ENST00000371629 978 ntTSL 2 BASIC16.41■□□□□ 0.22
SLCO4A1Q96BD0 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SLCO4A1Q96BD0 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SLCO4A1Q96BD0 KRT18P65-201ENST00000439811 1286 ntBASIC16.41■□□□□ 0.22
SLCO4A1Q96BD0 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SLCO4A1Q96BD0 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SLCO4A1Q96BD0 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC16.41■□□□□ 0.22
SLCO4A1Q96BD0 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SLCO4A1Q96BD0 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SLCO4A1Q96BD0 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
SLCO4A1Q96BD0 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SLCO4A1Q96BD0 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SLCO4A1Q96BD0 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC16.41■□□□□ 0.22
SLCO4A1Q96BD0 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
SLCO4A1Q96BD0 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SLCO4A1Q96BD0 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
SLCO4A1Q96BD0 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
SLCO4A1Q96BD0 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SLCO4A1Q96BD0 AC105917.1-201ENST00000506637 2539 ntBASIC16.41■□□□□ 0.22
SLCO4A1Q96BD0 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SLCO4A1Q96BD0 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SLCO4A1Q96BD0 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SLCO4A1Q96BD0 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC16.4■□□□□ 0.22
SLCO4A1Q96BD0 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SLCO4A1Q96BD0 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SLCO4A1Q96BD0 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SLCO4A1Q96BD0 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
SLCO4A1Q96BD0 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SLCO4A1Q96BD0 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SLCO4A1Q96BD0 AC092364.2-201ENST00000596710 2692 ntBASIC16.4■□□□□ 0.22
SLCO4A1Q96BD0 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC16.4■□□□□ 0.22
SLCO4A1Q96BD0 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SLCO4A1Q96BD0 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SLCO4A1Q96BD0 TSPY17P-201ENST00000450329 467 ntBASIC16.4■□□□□ 0.22
SLCO4A1Q96BD0 AC113404.2-201ENST00000507884 177 ntBASIC16.4■□□□□ 0.22
SLCO4A1Q96BD0 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC16.4■□□□□ 0.22
SLCO4A1Q96BD0 USP36-216ENST00000589424 970 ntTSL 5 BASIC16.4■□□□□ 0.22
SLCO4A1Q96BD0 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
SLCO4A1Q96BD0 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SLCO4A1Q96BD0 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
SLCO4A1Q96BD0 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SLCO4A1Q96BD0 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
SLCO4A1Q96BD0 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SLCO4A1Q96BD0 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
SLCO4A1Q96BD0 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SLCO4A1Q96BD0 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC16.4■□□□□ 0.22
SLCO4A1Q96BD0 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SLCO4A1Q96BD0 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms