Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 ECEL1P3-201ENST00000427961 737 ntBASIC16.87■□□□□ 0.29
VPS33AQ96AX1 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC16.87■□□□□ 0.29
VPS33AQ96AX1 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
VPS33AQ96AX1 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC16.87■□□□□ 0.29
VPS33AQ96AX1 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
VPS33AQ96AX1 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC16.87■□□□□ 0.29
VPS33AQ96AX1 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC16.87■□□□□ 0.29
VPS33AQ96AX1 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
VPS33AQ96AX1 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC16.87■□□□□ 0.29
VPS33AQ96AX1 GCSHP2-201ENST00000560971 527 ntBASIC16.87■□□□□ 0.29
VPS33AQ96AX1 MIR4497-201ENST00000583208 89 ntBASIC16.87■□□□□ 0.29
VPS33AQ96AX1 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
VPS33AQ96AX1 AC024563.2-201ENST00000603282 481 ntBASIC16.87■□□□□ 0.29
VPS33AQ96AX1 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
VPS33AQ96AX1 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
VPS33AQ96AX1 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
VPS33AQ96AX1 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
VPS33AQ96AX1 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC16.87■□□□□ 0.29
VPS33AQ96AX1 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
VPS33AQ96AX1 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.87■□□□□ 0.29
VPS33AQ96AX1 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC16.87■□□□□ 0.29
VPS33AQ96AX1 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
VPS33AQ96AX1 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
VPS33AQ96AX1 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
VPS33AQ96AX1 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
VPS33AQ96AX1 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
VPS33AQ96AX1 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
VPS33AQ96AX1 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
VPS33AQ96AX1 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
VPS33AQ96AX1 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
VPS33AQ96AX1 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
VPS33AQ96AX1 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC16.86■□□□□ 0.29
VPS33AQ96AX1 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
VPS33AQ96AX1 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC16.86■□□□□ 0.29
VPS33AQ96AX1 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
VPS33AQ96AX1 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
VPS33AQ96AX1 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC16.86■□□□□ 0.29
VPS33AQ96AX1 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
VPS33AQ96AX1 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
VPS33AQ96AX1 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
VPS33AQ96AX1 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
VPS33AQ96AX1 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
VPS33AQ96AX1 CRAT-202ENST00000393384 973 ntTSL 2 BASIC16.86■□□□□ 0.29
VPS33AQ96AX1 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC16.86■□□□□ 0.29
VPS33AQ96AX1 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
VPS33AQ96AX1 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
VPS33AQ96AX1 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC16.86■□□□□ 0.29
VPS33AQ96AX1 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
VPS33AQ96AX1 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
VPS33AQ96AX1 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
VPS33AQ96AX1 GPX4-207ENST00000589115 812 ntTSL 2 BASIC16.86■□□□□ 0.29
VPS33AQ96AX1 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
VPS33AQ96AX1 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
VPS33AQ96AX1 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
VPS33AQ96AX1 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
VPS33AQ96AX1 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
VPS33AQ96AX1 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
VPS33AQ96AX1 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
VPS33AQ96AX1 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC16.86■□□□□ 0.29
VPS33AQ96AX1 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
VPS33AQ96AX1 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
VPS33AQ96AX1 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
VPS33AQ96AX1 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
VPS33AQ96AX1 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
VPS33AQ96AX1 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
VPS33AQ96AX1 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
VPS33AQ96AX1 PCDHA14-201ENST00000506751 2298 ntBASIC16.85■□□□□ 0.29
VPS33AQ96AX1 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC16.85■□□□□ 0.29
VPS33AQ96AX1 MMP23A-201ENST00000234610 1017 ntBASIC16.85■□□□□ 0.29
VPS33AQ96AX1 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC16.85■□□□□ 0.29
VPS33AQ96AX1 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
VPS33AQ96AX1 AP000523.1-201ENST00000398242 1049 ntBASIC16.85■□□□□ 0.29
VPS33AQ96AX1 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
VPS33AQ96AX1 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC16.85■□□□□ 0.29
VPS33AQ96AX1 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC16.85■□□□□ 0.29
VPS33AQ96AX1 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC16.85■□□□□ 0.29
VPS33AQ96AX1 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC16.85■□□□□ 0.29
VPS33AQ96AX1 TMEM191A-211ENST00000637163 1067 ntBASIC16.85■□□□□ 0.29
VPS33AQ96AX1 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
VPS33AQ96AX1 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
VPS33AQ96AX1 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
VPS33AQ96AX1 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
VPS33AQ96AX1 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
VPS33AQ96AX1 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
VPS33AQ96AX1 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
VPS33AQ96AX1 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
VPS33AQ96AX1 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
VPS33AQ96AX1 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
VPS33AQ96AX1 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
VPS33AQ96AX1 AC008894.3-201ENST00000624324 3103 ntBASIC16.85■□□□□ 0.29
VPS33AQ96AX1 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
VPS33AQ96AX1 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
VPS33AQ96AX1 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
VPS33AQ96AX1 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
VPS33AQ96AX1 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
VPS33AQ96AX1 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
VPS33AQ96AX1 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
VPS33AQ96AX1 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
VPS33AQ96AX1 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
VPS33AQ96AX1 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms