Protein–RNA interactions for Protein: Q92600

CNOT9, CCR4-NOT transcription complex subunit 9, humanhuman

Known RBP Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9Q92600 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC16.17■□□□□ 0.18
CNOT9Q92600 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CNOT9Q92600 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
CNOT9Q92600 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
CNOT9Q92600 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CNOT9Q92600 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CNOT9Q92600 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CNOT9Q92600 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC16.16■□□□□ 0.18
CNOT9Q92600 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CNOT9Q92600 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
CNOT9Q92600 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CNOT9Q92600 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CNOT9Q92600 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
CNOT9Q92600 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CNOT9Q92600 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CNOT9Q92600 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
CNOT9Q92600 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
CNOT9Q92600 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CNOT9Q92600 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
CNOT9Q92600 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
CNOT9Q92600 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC16.16■□□□□ 0.18
CNOT9Q92600 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC16.16■□□□□ 0.18
CNOT9Q92600 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC16.16■□□□□ 0.18
CNOT9Q92600 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC16.16■□□□□ 0.18
CNOT9Q92600 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CNOT9Q92600 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC16.16■□□□□ 0.18
CNOT9Q92600 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC16.16■□□□□ 0.18
CNOT9Q92600 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
CNOT9Q92600 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CNOT9Q92600 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
CNOT9Q92600 AC124067.4-201ENST00000519691 2379 ntBASIC16.16■□□□□ 0.18
CNOT9Q92600 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC16.16■□□□□ 0.18
CNOT9Q92600 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC16.16■□□□□ 0.18
CNOT9Q92600 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
CNOT9Q92600 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CNOT9Q92600 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CNOT9Q92600 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CNOT9Q92600 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CNOT9Q92600 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16.16■□□□□ 0.18
CNOT9Q92600 AC080080.1-201ENST00000625121 2420 ntBASIC16.16■□□□□ 0.18
CNOT9Q92600 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CNOT9Q92600 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC16.16■□□□□ 0.18
CNOT9Q92600 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC16.16■□□□□ 0.18
CNOT9Q92600 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CNOT9Q92600 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CNOT9Q92600 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
CNOT9Q92600 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CNOT9Q92600 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CNOT9Q92600 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC16.15■□□□□ 0.18
CNOT9Q92600 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CNOT9Q92600 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
CNOT9Q92600 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CNOT9Q92600 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CNOT9Q92600 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
CNOT9Q92600 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CNOT9Q92600 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CNOT9Q92600 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
CNOT9Q92600 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
CNOT9Q92600 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC16.15■□□□□ 0.18
CNOT9Q92600 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CNOT9Q92600 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC16.15■□□□□ 0.18
CNOT9Q92600 TSSC2-201ENST00000450217 709 ntBASIC16.15■□□□□ 0.18
CNOT9Q92600 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC16.15■□□□□ 0.18
CNOT9Q92600 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC16.15■□□□□ 0.18
CNOT9Q92600 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
CNOT9Q92600 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC16.15■□□□□ 0.18
CNOT9Q92600 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CNOT9Q92600 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
CNOT9Q92600 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
CNOT9Q92600 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CNOT9Q92600 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC16.15■□□□□ 0.18
CNOT9Q92600 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC16.15■□□□□ 0.18
CNOT9Q92600 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CNOT9Q92600 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
CNOT9Q92600 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
CNOT9Q92600 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
CNOT9Q92600 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.18
CNOT9Q92600 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
CNOT9Q92600 IER3-202ENST00000376377 1350 ntBASIC16.14■□□□□ 0.17
CNOT9Q92600 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC16.14■□□□□ 0.17
CNOT9Q92600 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
CNOT9Q92600 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
CNOT9Q92600 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
CNOT9Q92600 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CNOT9Q92600 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CNOT9Q92600 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
CNOT9Q92600 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC16.14■□□□□ 0.17
CNOT9Q92600 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CNOT9Q92600 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CNOT9Q92600 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.14■□□□□ 0.17
CNOT9Q92600 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC16.14■□□□□ 0.17
CNOT9Q92600 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CNOT9Q92600 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
CNOT9Q92600 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC16.14■□□□□ 0.17
CNOT9Q92600 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CNOT9Q92600 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CNOT9Q92600 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC16.14■□□□□ 0.17
CNOT9Q92600 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CNOT9Q92600 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC16.14■□□□□ 0.17
CNOT9Q92600 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms