Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
DDX1Q92499 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
DDX1Q92499 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC18.64■□□□□ 0.57
DDX1Q92499 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
DDX1Q92499 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
DDX1Q92499 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
DDX1Q92499 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
DDX1Q92499 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC18.64■□□□□ 0.57
DDX1Q92499 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
DDX1Q92499 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC18.64■□□□□ 0.57
DDX1Q92499 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
DDX1Q92499 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
DDX1Q92499 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
DDX1Q92499 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
DDX1Q92499 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
DDX1Q92499 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC18.63■□□□□ 0.57
DDX1Q92499 AC106820.2-201ENST00000563775 3264 ntBASIC18.63■□□□□ 0.57
DDX1Q92499 INTS4P1-201ENST00000438455 1935 ntBASIC18.63■□□□□ 0.57
DDX1Q92499 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.63■□□□□ 0.57
DDX1Q92499 MYCLP1-201ENST00000372451 1075 ntBASIC18.63■□□□□ 0.57
DDX1Q92499 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
DDX1Q92499 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
DDX1Q92499 AL590627.1-203ENST00000421194 1026 ntBASIC18.63■□□□□ 0.57
DDX1Q92499 LINC00265-3P-201ENST00000447588 903 ntBASIC18.63■□□□□ 0.57
DDX1Q92499 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC18.63■□□□□ 0.57
DDX1Q92499 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
DDX1Q92499 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC18.63■□□□□ 0.57
DDX1Q92499 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
DDX1Q92499 BMF-207ENST00000559701 630 ntTSL 3 BASIC18.63■□□□□ 0.57
DDX1Q92499 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC18.63■□□□□ 0.57
DDX1Q92499 STK25P1-201ENST00000585406 838 ntBASIC18.63■□□□□ 0.57
DDX1Q92499 AL121912.1-201ENST00000603683 238 ntBASIC18.63■□□□□ 0.57
DDX1Q92499 AD001527.2-201ENST00000622994 785 ntBASIC18.63■□□□□ 0.57
DDX1Q92499 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
DDX1Q92499 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
DDX1Q92499 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
DDX1Q92499 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
DDX1Q92499 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC18.63■□□□□ 0.57
DDX1Q92499 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC18.63■□□□□ 0.57
DDX1Q92499 AC022211.2-201ENST00000585075 2527 ntBASIC18.63■□□□□ 0.57
DDX1Q92499 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
DDX1Q92499 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC18.63■□□□□ 0.57
DDX1Q92499 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
DDX1Q92499 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
DDX1Q92499 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC18.63■□□□□ 0.57
DDX1Q92499 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
DDX1Q92499 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
DDX1Q92499 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
DDX1Q92499 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
DDX1Q92499 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
DDX1Q92499 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
DDX1Q92499 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
DDX1Q92499 CD9-202ENST00000382515 1229 ntTSL 5 BASIC18.62■□□□□ 0.57
DDX1Q92499 CTNS-203ENST00000399306 803 ntTSL 3 BASIC18.62■□□□□ 0.57
DDX1Q92499 KRT18P31-201ENST00000506277 1292 ntBASIC18.62■□□□□ 0.57
DDX1Q92499 IGHV3-52-201ENST00000519770 353 ntBASIC18.62■□□□□ 0.57
DDX1Q92499 AC012615.1-201ENST00000565797 1299 ntBASIC18.62■□□□□ 0.57
DDX1Q92499 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC18.62■□□□□ 0.57
DDX1Q92499 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
DDX1Q92499 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
DDX1Q92499 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
DDX1Q92499 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC18.62■□□□□ 0.57
DDX1Q92499 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
DDX1Q92499 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
DDX1Q92499 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
DDX1Q92499 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
DDX1Q92499 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
DDX1Q92499 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
DDX1Q92499 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
DDX1Q92499 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC18.62■□□□□ 0.57
DDX1Q92499 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
DDX1Q92499 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
DDX1Q92499 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC18.62■□□□□ 0.57
DDX1Q92499 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
DDX1Q92499 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
DDX1Q92499 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC18.61■□□□□ 0.57
DDX1Q92499 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
DDX1Q92499 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
DDX1Q92499 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
DDX1Q92499 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
DDX1Q92499 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
DDX1Q92499 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
DDX1Q92499 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
DDX1Q92499 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC18.61■□□□□ 0.57
DDX1Q92499 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC18.61■□□□□ 0.57
DDX1Q92499 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
DDX1Q92499 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
DDX1Q92499 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
DDX1Q92499 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
DDX1Q92499 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
DDX1Q92499 RCN1P2-201ENST00000398357 915 ntBASIC18.61■□□□□ 0.57
DDX1Q92499 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
DDX1Q92499 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
DDX1Q92499 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
DDX1Q92499 PNN-202ENST00000553331 656 ntTSL 3 BASIC18.61■□□□□ 0.57
DDX1Q92499 TPM1-218ENST00000559281 851 ntTSL 5 BASIC18.61■□□□□ 0.57
DDX1Q92499 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC18.61■□□□□ 0.57
DDX1Q92499 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC18.61■□□□□ 0.57
DDX1Q92499 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
DDX1Q92499 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms