Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 AL513480.1-201ENST00000451731 511 ntBASIC22.83■■□□□ 1.25
RAPGEF4Q8WZA2 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC22.83■■□□□ 1.25
RAPGEF4Q8WZA2 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC22.83■■□□□ 1.25
RAPGEF4Q8WZA2 TK1-204ENST00000590430 683 ntTSL 3 BASIC22.83■■□□□ 1.25
RAPGEF4Q8WZA2 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC22.83■■□□□ 1.25
RAPGEF4Q8WZA2 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC22.83■■□□□ 1.25
RAPGEF4Q8WZA2 ACTL9-202ENST00000612068 1252 ntBASIC22.83■■□□□ 1.25
RAPGEF4Q8WZA2 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
RAPGEF4Q8WZA2 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
RAPGEF4Q8WZA2 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
RAPGEF4Q8WZA2 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
RAPGEF4Q8WZA2 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
RAPGEF4Q8WZA2 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
RAPGEF4Q8WZA2 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
RAPGEF4Q8WZA2 AC092919.2-201ENST00000623631 1645 ntBASIC22.82■■□□□ 1.24
RAPGEF4Q8WZA2 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
RAPGEF4Q8WZA2 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC22.82■■□□□ 1.24
RAPGEF4Q8WZA2 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC22.82■■□□□ 1.24
RAPGEF4Q8WZA2 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
RAPGEF4Q8WZA2 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC22.82■■□□□ 1.24
RAPGEF4Q8WZA2 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
RAPGEF4Q8WZA2 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC22.82■■□□□ 1.24
RAPGEF4Q8WZA2 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
RAPGEF4Q8WZA2 AC006116.8-202ENST00000587620 1550 ntBASIC22.82■■□□□ 1.24
RAPGEF4Q8WZA2 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC22.82■■□□□ 1.24
RAPGEF4Q8WZA2 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
RAPGEF4Q8WZA2 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC22.82■■□□□ 1.24
RAPGEF4Q8WZA2 FAM8A3P-201ENST00000427218 844 ntBASIC22.82■■□□□ 1.24
RAPGEF4Q8WZA2 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC22.82■■□□□ 1.24
RAPGEF4Q8WZA2 AC004449.1-201ENST00000564240 433 ntBASIC22.82■■□□□ 1.24
RAPGEF4Q8WZA2 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
RAPGEF4Q8WZA2 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC22.82■■□□□ 1.24
RAPGEF4Q8WZA2 AC092364.2-202ENST00000597012 1073 ntBASIC22.82■■□□□ 1.24
RAPGEF4Q8WZA2 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC22.82■■□□□ 1.24
RAPGEF4Q8WZA2 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
RAPGEF4Q8WZA2 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
RAPGEF4Q8WZA2 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC22.82■■□□□ 1.24
RAPGEF4Q8WZA2 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
RAPGEF4Q8WZA2 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC22.82■■□□□ 1.24
RAPGEF4Q8WZA2 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC22.82■■□□□ 1.24
RAPGEF4Q8WZA2 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC22.82■■□□□ 1.24
RAPGEF4Q8WZA2 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC22.82■■□□□ 1.24
RAPGEF4Q8WZA2 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
RAPGEF4Q8WZA2 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC22.81■■□□□ 1.24
RAPGEF4Q8WZA2 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC22.81■■□□□ 1.24
RAPGEF4Q8WZA2 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
RAPGEF4Q8WZA2 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
RAPGEF4Q8WZA2 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC22.81■■□□□ 1.24
RAPGEF4Q8WZA2 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
RAPGEF4Q8WZA2 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC22.81■■□□□ 1.24
RAPGEF4Q8WZA2 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC22.81■■□□□ 1.24
RAPGEF4Q8WZA2 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
RAPGEF4Q8WZA2 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC22.81■■□□□ 1.24
RAPGEF4Q8WZA2 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
RAPGEF4Q8WZA2 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC22.81■■□□□ 1.24
RAPGEF4Q8WZA2 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
RAPGEF4Q8WZA2 PAWRP1-201ENST00000451083 565 ntBASIC22.81■■□□□ 1.24
RAPGEF4Q8WZA2 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
RAPGEF4Q8WZA2 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC22.81■■□□□ 1.24
RAPGEF4Q8WZA2 MNT-208ENST00000575394 606 ntTSL 4 BASIC22.81■■□□□ 1.24
RAPGEF4Q8WZA2 AC011467.4-201ENST00000594891 528 ntBASIC22.81■■□□□ 1.24
RAPGEF4Q8WZA2 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
RAPGEF4Q8WZA2 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC22.81■■□□□ 1.24
RAPGEF4Q8WZA2 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC22.81■■□□□ 1.24
RAPGEF4Q8WZA2 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC22.81■■□□□ 1.24
RAPGEF4Q8WZA2 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC22.81■■□□□ 1.24
RAPGEF4Q8WZA2 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
RAPGEF4Q8WZA2 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC22.81■■□□□ 1.24
RAPGEF4Q8WZA2 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC22.81■■□□□ 1.24
RAPGEF4Q8WZA2 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
RAPGEF4Q8WZA2 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC22.81■■□□□ 1.24
RAPGEF4Q8WZA2 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC22.8■■□□□ 1.24
RAPGEF4Q8WZA2 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC22.8■■□□□ 1.24
RAPGEF4Q8WZA2 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC22.8■■□□□ 1.24
RAPGEF4Q8WZA2 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
RAPGEF4Q8WZA2 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
RAPGEF4Q8WZA2 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC22.8■■□□□ 1.24
RAPGEF4Q8WZA2 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC22.8■■□□□ 1.24
RAPGEF4Q8WZA2 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
RAPGEF4Q8WZA2 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC22.8■■□□□ 1.24
RAPGEF4Q8WZA2 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC22.8■■□□□ 1.24
RAPGEF4Q8WZA2 AC022145.2-201ENST00000598203 171 ntBASIC22.8■■□□□ 1.24
RAPGEF4Q8WZA2 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC22.8■■□□□ 1.24
RAPGEF4Q8WZA2 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC22.8■■□□□ 1.24
RAPGEF4Q8WZA2 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC22.8■■□□□ 1.24
RAPGEF4Q8WZA2 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC22.8■■□□□ 1.24
RAPGEF4Q8WZA2 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
RAPGEF4Q8WZA2 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
RAPGEF4Q8WZA2 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC22.8■■□□□ 1.24
RAPGEF4Q8WZA2 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC22.79■■□□□ 1.24
RAPGEF4Q8WZA2 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC22.79■■□□□ 1.24
RAPGEF4Q8WZA2 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
RAPGEF4Q8WZA2 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
RAPGEF4Q8WZA2 AL121761.2-201ENST00000598007 1648 ntBASIC22.79■■□□□ 1.24
RAPGEF4Q8WZA2 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
RAPGEF4Q8WZA2 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC22.79■■□□□ 1.24
RAPGEF4Q8WZA2 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
RAPGEF4Q8WZA2 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC22.79■■□□□ 1.24
RAPGEF4Q8WZA2 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
RAPGEF4Q8WZA2 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC22.79■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms