Protein–RNA interactions for Protein: Q8NBK3

SUMF1, Sulfatase-modifying factor 1, humanhuman

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMF1Q8NBK3 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SUMF1Q8NBK3 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SUMF1Q8NBK3 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SUMF1Q8NBK3 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC17.1■□□□□ 0.33
SUMF1Q8NBK3 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SUMF1Q8NBK3 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
SUMF1Q8NBK3 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SUMF1Q8NBK3 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC17.1■□□□□ 0.33
SUMF1Q8NBK3 SPCS2P4-201ENST00000436160 681 ntBASIC17.1■□□□□ 0.33
SUMF1Q8NBK3 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC17.1■□□□□ 0.33
SUMF1Q8NBK3 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC17.1■□□□□ 0.33
SUMF1Q8NBK3 KRT17P7-201ENST00000451704 1104 ntBASIC17.1■□□□□ 0.33
SUMF1Q8NBK3 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC17.1■□□□□ 0.33
SUMF1Q8NBK3 AC004890.2-204ENST00000481968 304 ntBASIC17.1■□□□□ 0.33
SUMF1Q8NBK3 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC17.1■□□□□ 0.33
SUMF1Q8NBK3 TMED1-207ENST00000591695 809 ntTSL 5 BASIC17.1■□□□□ 0.33
SUMF1Q8NBK3 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SUMF1Q8NBK3 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SUMF1Q8NBK3 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SUMF1Q8NBK3 CU639417.3-201ENST00000624240 1404 ntBASIC17.1■□□□□ 0.33
SUMF1Q8NBK3 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SUMF1Q8NBK3 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
SUMF1Q8NBK3 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SUMF1Q8NBK3 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SUMF1Q8NBK3 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC17.1■□□□□ 0.33
SUMF1Q8NBK3 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC17.09■□□□□ 0.33
SUMF1Q8NBK3 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
SUMF1Q8NBK3 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SUMF1Q8NBK3 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SUMF1Q8NBK3 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SUMF1Q8NBK3 AL049812.1-201ENST00000432563 2267 ntBASIC17.09■□□□□ 0.33
SUMF1Q8NBK3 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SUMF1Q8NBK3 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
SUMF1Q8NBK3 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SUMF1Q8NBK3 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SUMF1Q8NBK3 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC17.09■□□□□ 0.33
SUMF1Q8NBK3 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC17.09■□□□□ 0.33
SUMF1Q8NBK3 MRPS18AP1-201ENST00000414458 589 ntBASIC17.09■□□□□ 0.33
SUMF1Q8NBK3 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SUMF1Q8NBK3 AC092580.3-201ENST00000430932 139 ntBASIC17.09■□□□□ 0.33
SUMF1Q8NBK3 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC17.09■□□□□ 0.33
SUMF1Q8NBK3 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC17.09■□□□□ 0.33
SUMF1Q8NBK3 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SUMF1Q8NBK3 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC17.09■□□□□ 0.33
SUMF1Q8NBK3 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC17.09■□□□□ 0.33
SUMF1Q8NBK3 IGHV3-71-201ENST00000523324 359 ntBASIC17.09■□□□□ 0.33
SUMF1Q8NBK3 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC17.09■□□□□ 0.33
SUMF1Q8NBK3 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC17.09■□□□□ 0.33
SUMF1Q8NBK3 AC009118.2-201ENST00000613275 655 ntBASIC17.09■□□□□ 0.33
SUMF1Q8NBK3 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SUMF1Q8NBK3 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
SUMF1Q8NBK3 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC17.09■□□□□ 0.33
SUMF1Q8NBK3 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SUMF1Q8NBK3 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC17.09■□□□□ 0.33
SUMF1Q8NBK3 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC17.09■□□□□ 0.33
SUMF1Q8NBK3 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SUMF1Q8NBK3 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SUMF1Q8NBK3 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
SUMF1Q8NBK3 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC17.09■□□□□ 0.33
SUMF1Q8NBK3 USP39-202ENST00000409025 1946 ntTSL 5 BASIC17.09■□□□□ 0.33
SUMF1Q8NBK3 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SUMF1Q8NBK3 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SUMF1Q8NBK3 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SUMF1Q8NBK3 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SUMF1Q8NBK3 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC17.09■□□□□ 0.33
SUMF1Q8NBK3 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
SUMF1Q8NBK3 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
SUMF1Q8NBK3 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SUMF1Q8NBK3 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
SUMF1Q8NBK3 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC17.08■□□□□ 0.33
SUMF1Q8NBK3 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC17.08■□□□□ 0.33
SUMF1Q8NBK3 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC17.08■□□□□ 0.33
SUMF1Q8NBK3 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SUMF1Q8NBK3 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC17.08■□□□□ 0.33
SUMF1Q8NBK3 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SUMF1Q8NBK3 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SUMF1Q8NBK3 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SUMF1Q8NBK3 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SUMF1Q8NBK3 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
SUMF1Q8NBK3 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SUMF1Q8NBK3 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SUMF1Q8NBK3 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SUMF1Q8NBK3 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC17.08■□□□□ 0.32
SUMF1Q8NBK3 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC17.08■□□□□ 0.32
SUMF1Q8NBK3 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC17.08■□□□□ 0.32
SUMF1Q8NBK3 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SUMF1Q8NBK3 DUTP2-201ENST00000519164 463 ntBASIC17.08■□□□□ 0.32
SUMF1Q8NBK3 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC17.08■□□□□ 0.32
SUMF1Q8NBK3 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC17.08■□□□□ 0.32
SUMF1Q8NBK3 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC17.08■□□□□ 0.32
SUMF1Q8NBK3 LINC01225-203ENST00000563550 1244 ntBASIC17.08■□□□□ 0.32
SUMF1Q8NBK3 RARRES2P8-201ENST00000566335 367 ntBASIC17.08■□□□□ 0.32
SUMF1Q8NBK3 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC17.08■□□□□ 0.32
SUMF1Q8NBK3 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SUMF1Q8NBK3 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SUMF1Q8NBK3 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.08■□□□□ 0.32
SUMF1Q8NBK3 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
SUMF1Q8NBK3 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
SUMF1Q8NBK3 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
SUMF1Q8NBK3 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms