Protein–RNA interactions for Protein: Q5VTA0

PRAMEF17, PRAME family member 17, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF17Q5VTA0 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PRAMEF17Q5VTA0 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC16.72■□□□□ 0.27
PRAMEF17Q5VTA0 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PRAMEF17Q5VTA0 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PRAMEF17Q5VTA0 BICD1-207ENST00000551848 1962 ntBASIC16.71■□□□□ 0.27
PRAMEF17Q5VTA0 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC16.71■□□□□ 0.27
PRAMEF17Q5VTA0 AC104109.2-201ENST00000602919 1418 ntBASIC16.71■□□□□ 0.27
PRAMEF17Q5VTA0 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PRAMEF17Q5VTA0 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
PRAMEF17Q5VTA0 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
PRAMEF17Q5VTA0 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC16.71■□□□□ 0.27
PRAMEF17Q5VTA0 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.27
PRAMEF17Q5VTA0 PC-208ENST00000529047 1607 ntTSL 3 BASIC16.71■□□□□ 0.27
PRAMEF17Q5VTA0 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC16.71■□□□□ 0.27
PRAMEF17Q5VTA0 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PRAMEF17Q5VTA0 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PRAMEF17Q5VTA0 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PRAMEF17Q5VTA0 IGHV3-22-201ENST00000520721 359 ntBASIC16.71■□□□□ 0.27
PRAMEF17Q5VTA0 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC16.71■□□□□ 0.27
PRAMEF17Q5VTA0 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PRAMEF17Q5VTA0 CYB561-217ENST00000582997 877 ntTSL 5 BASIC16.71■□□□□ 0.27
PRAMEF17Q5VTA0 SDCCAG3P1-201ENST00000589292 1150 ntBASIC16.71■□□□□ 0.27
PRAMEF17Q5VTA0 AC023511.2-201ENST00000618803 211 ntBASIC16.71■□□□□ 0.27
PRAMEF17Q5VTA0 AC008735.5-201ENST00000623544 497 ntBASIC16.71■□□□□ 0.27
PRAMEF17Q5VTA0 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC16.71■□□□□ 0.27
PRAMEF17Q5VTA0 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PRAMEF17Q5VTA0 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PRAMEF17Q5VTA0 AL353593.2-201ENST00000602529 1483 ntBASIC16.71■□□□□ 0.27
PRAMEF17Q5VTA0 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC16.71■□□□□ 0.27
PRAMEF17Q5VTA0 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PRAMEF17Q5VTA0 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
PRAMEF17Q5VTA0 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
PRAMEF17Q5VTA0 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PRAMEF17Q5VTA0 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
PRAMEF17Q5VTA0 COMP-202ENST00000425807 2292 ntTSL 2 BASIC16.71■□□□□ 0.27
PRAMEF17Q5VTA0 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.26
PRAMEF17Q5VTA0 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
PRAMEF17Q5VTA0 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.26
PRAMEF17Q5VTA0 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PRAMEF17Q5VTA0 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC16.7■□□□□ 0.26
PRAMEF17Q5VTA0 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PRAMEF17Q5VTA0 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC16.7■□□□□ 0.26
PRAMEF17Q5VTA0 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PRAMEF17Q5VTA0 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PRAMEF17Q5VTA0 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PRAMEF17Q5VTA0 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
PRAMEF17Q5VTA0 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PRAMEF17Q5VTA0 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PRAMEF17Q5VTA0 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PRAMEF17Q5VTA0 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PRAMEF17Q5VTA0 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PRAMEF17Q5VTA0 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC16.7■□□□□ 0.26
PRAMEF17Q5VTA0 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC16.7■□□□□ 0.26
PRAMEF17Q5VTA0 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC16.7■□□□□ 0.26
PRAMEF17Q5VTA0 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC16.7■□□□□ 0.26
PRAMEF17Q5VTA0 MSRA-206ENST00000521209 814 ntTSL 3 BASIC16.7■□□□□ 0.26
PRAMEF17Q5VTA0 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
PRAMEF17Q5VTA0 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC16.7■□□□□ 0.26
PRAMEF17Q5VTA0 COPE-211ENST00000600932 1144 ntTSL 5 BASIC16.7■□□□□ 0.26
PRAMEF17Q5VTA0 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
PRAMEF17Q5VTA0 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC16.7■□□□□ 0.26
PRAMEF17Q5VTA0 AC073592.4-201ENST00000623827 446 ntBASIC16.7■□□□□ 0.26
PRAMEF17Q5VTA0 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
PRAMEF17Q5VTA0 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PRAMEF17Q5VTA0 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PRAMEF17Q5VTA0 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC16.7■□□□□ 0.26
PRAMEF17Q5VTA0 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PRAMEF17Q5VTA0 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC16.7■□□□□ 0.26
PRAMEF17Q5VTA0 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
PRAMEF17Q5VTA0 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC16.7■□□□□ 0.26
PRAMEF17Q5VTA0 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
PRAMEF17Q5VTA0 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PRAMEF17Q5VTA0 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PRAMEF17Q5VTA0 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PRAMEF17Q5VTA0 AC138028.4-201ENST00000564984 1845 ntBASIC16.7■□□□□ 0.26
PRAMEF17Q5VTA0 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
PRAMEF17Q5VTA0 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
PRAMEF17Q5VTA0 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PRAMEF17Q5VTA0 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PRAMEF17Q5VTA0 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PRAMEF17Q5VTA0 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PRAMEF17Q5VTA0 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC16.69■□□□□ 0.26
PRAMEF17Q5VTA0 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PRAMEF17Q5VTA0 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
PRAMEF17Q5VTA0 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PRAMEF17Q5VTA0 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PRAMEF17Q5VTA0 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PRAMEF17Q5VTA0 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PRAMEF17Q5VTA0 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PRAMEF17Q5VTA0 ABALON-201ENST00000629058 1903 ntBASIC16.69■□□□□ 0.26
PRAMEF17Q5VTA0 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
PRAMEF17Q5VTA0 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PRAMEF17Q5VTA0 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PRAMEF17Q5VTA0 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
PRAMEF17Q5VTA0 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC16.69■□□□□ 0.26
PRAMEF17Q5VTA0 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC16.69■□□□□ 0.26
PRAMEF17Q5VTA0 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
PRAMEF17Q5VTA0 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC16.69■□□□□ 0.26
PRAMEF17Q5VTA0 PMS2P1-201ENST00000431037 1228 ntBASIC16.69■□□□□ 0.26
PRAMEF17Q5VTA0 RNA5SP415-201ENST00000517246 115 ntBASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms