Protein–RNA interactions for Protein: Q12864

CDH17, Cadherin-17, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17Q12864 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
CDH17Q12864 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDH17Q12864 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC17.71■□□□□ 0.43
CDH17Q12864 AC080080.1-201ENST00000625121 2420 ntBASIC17.71■□□□□ 0.43
CDH17Q12864 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CDH17Q12864 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
CDH17Q12864 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CDH17Q12864 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDH17Q12864 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC17.71■□□□□ 0.43
CDH17Q12864 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC17.71■□□□□ 0.43
CDH17Q12864 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDH17Q12864 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDH17Q12864 IER3-202ENST00000376377 1350 ntBASIC17.71■□□□□ 0.43
CDH17Q12864 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDH17Q12864 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDH17Q12864 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDH17Q12864 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
CDH17Q12864 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC17.71■□□□□ 0.43
CDH17Q12864 ABR-204ENST00000543210 1049 ntTSL 2 BASIC17.71■□□□□ 0.43
CDH17Q12864 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC17.71■□□□□ 0.43
CDH17Q12864 AC111152.3-201ENST00000569699 673 ntBASIC17.71■□□□□ 0.43
CDH17Q12864 ABR-217ENST00000572441 563 ntTSL 4 BASIC17.71■□□□□ 0.43
CDH17Q12864 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CDH17Q12864 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
CDH17Q12864 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDH17Q12864 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
CDH17Q12864 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC17.71■□□□□ 0.43
CDH17Q12864 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDH17Q12864 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.42
CDH17Q12864 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
CDH17Q12864 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC17.71■□□□□ 0.42
CDH17Q12864 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDH17Q12864 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDH17Q12864 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC17.7■□□□□ 0.42
CDH17Q12864 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDH17Q12864 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
CDH17Q12864 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
CDH17Q12864 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
CDH17Q12864 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CDH17Q12864 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
CDH17Q12864 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
CDH17Q12864 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDH17Q12864 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
CDH17Q12864 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
CDH17Q12864 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDH17Q12864 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDH17Q12864 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDH17Q12864 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC17.7■□□□□ 0.42
CDH17Q12864 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC17.7■□□□□ 0.42
CDH17Q12864 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC17.7■□□□□ 0.42
CDH17Q12864 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC17.7■□□□□ 0.42
CDH17Q12864 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC17.7■□□□□ 0.42
CDH17Q12864 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC17.7■□□□□ 0.42
CDH17Q12864 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
CDH17Q12864 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDH17Q12864 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CDH17Q12864 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
CDH17Q12864 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.7■□□□□ 0.42
CDH17Q12864 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
CDH17Q12864 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.7■□□□□ 0.42
CDH17Q12864 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDH17Q12864 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDH17Q12864 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CDH17Q12864 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.7■□□□□ 0.42
CDH17Q12864 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC17.7■□□□□ 0.42
CDH17Q12864 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.7■□□□□ 0.42
CDH17Q12864 AL049757.1-201ENST00000616842 1596 ntBASIC17.7■□□□□ 0.42
CDH17Q12864 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.7■□□□□ 0.42
CDH17Q12864 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CDH17Q12864 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC17.7■□□□□ 0.42
CDH17Q12864 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.7■□□□□ 0.42
CDH17Q12864 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDH17Q12864 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDH17Q12864 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CDH17Q12864 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDH17Q12864 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CDH17Q12864 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CDH17Q12864 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDH17Q12864 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDH17Q12864 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDH17Q12864 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC17.69■□□□□ 0.42
CDH17Q12864 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC17.69■□□□□ 0.42
CDH17Q12864 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDH17Q12864 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CDH17Q12864 AC116353.5-201ENST00000638148 1699 ntBASIC17.69■□□□□ 0.42
CDH17Q12864 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDH17Q12864 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDH17Q12864 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CDH17Q12864 DRAXINP1-201ENST00000437611 948 ntBASIC17.69■□□□□ 0.42
CDH17Q12864 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC17.69■□□□□ 0.42
CDH17Q12864 AC091607.1-201ENST00000490318 1060 ntBASIC17.69■□□□□ 0.42
CDH17Q12864 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC17.69■□□□□ 0.42
CDH17Q12864 AP005901.3-202ENST00000581653 237 ntBASIC17.69■□□□□ 0.42
CDH17Q12864 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CDH17Q12864 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC17.69■□□□□ 0.42
CDH17Q12864 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDH17Q12864 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDH17Q12864 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDH17Q12864 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CDH17Q12864 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms