Protein–RNA interactions for Protein: Q07955

SRSF1, Serine/arginine-rich splicing factor 1, humanhuman

Known RBP eCLIP

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1Q07955 TANK-212ENST00000440506 550 ntTSL 37.18□□□□□ -1.266e-9■□□□□ 8.7
SRSF1Q07955 TANK-203ENST00000402568 878 ntTSL 5 BASIC7.11□□□□□ -1.276e-9■□□□□ 8.7
SRSF1Q07955 TANK-221ENST00000483622 566 ntTSL 56.59□□□□□ -1.356e-9■□□□□ 8.7
SRSF1Q07955 TANK-205ENST00000405852 2155 ntTSL 5 BASIC6.13□□□□□ -1.436e-9■□□□□ 8.7
SRSF1Q07955 TANK-213ENST00000441987 533 ntTSL 56.07□□□□□ -1.446e-9■□□□□ 8.7
SRSF1Q07955 TANK-206ENST00000406287 875 ntTSL 5 BASIC4.49□□□□□ -1.696e-9■□□□□ 8.7
SRSF1Q07955 TANK-217ENST00000463502 570 ntTSL 34.38□□□□□ -1.716e-9■□□□□ 8.7
SRSF1Q07955 TANK-220ENST00000477952 427 ntTSL 24.12□□□□□ -1.756e-9■□□□□ 8.7
SRSF1Q07955 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.866e-9■□□□□ 8.7
SRSF1Q07955 TANK-208ENST00000432002 600 ntTSL 53.14□□□□□ -1.916e-9■□□□□ 8.7
SRSF1Q07955 TANK-209ENST00000432692 576 ntTSL 52.95□□□□□ -1.946e-9■□□□□ 8.7
SRSF1Q07955 LUC7L3-220ENST00000512549 204 ntTSL 51.6□□□□□ -2.155e-7■□□□□ 8.7
SRSF1Q07955 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.554e-6■□□□□ 8.7
SRSF1Q07955 FLNC-202ENST00000346177 9042 ntAPPRIS ALT1 TSL 1 (best) BASIC11.22□□□□□ -0.614e-6■□□□□ 8.7
SRSF1Q07955 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.814e-6■□□□□ 8.7
SRSF1Q07955 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC14.87□□□□□ -0.031e-6■□□□□ 8.7
SRSF1Q07955 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC14□□□□□ -0.171e-6■□□□□ 8.7
SRSF1Q07955 RAB30-AS1-201ENST00000501011 607 ntTSL 1 (best)11.29□□□□□ -0.61e-6■□□□□ 8.7
SRSF1Q07955 RAB30-AS1-203ENST00000527627 504 ntTSL 311.29□□□□□ -0.61e-6■□□□□ 8.7
SRSF1Q07955 RAB30-AS1-206ENST00000533528 340 ntTSL 510.54□□□□□ -0.721e-6■□□□□ 8.7
SRSF1Q07955 RAB30-AS1-208ENST00000534499 597 ntTSL 28.95□□□□□ -0.981e-6■□□□□ 8.7
SRSF1Q07955 FBXO31-208ENST00000636077 660 ntTSL 520.33■□□□□ 0.853e-8■□□□□ 8.7
SRSF1Q07955 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC16.85■□□□□ 0.293e-8■□□□□ 8.7
SRSF1Q07955 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.153e-8■□□□□ 8.7
SRSF1Q07955 FBXO31-204ENST00000565593 2717 ntTSL 515.15■□□□□ 0.023e-8■□□□□ 8.7
SRSF1Q07955 FBXO31-202ENST00000561664 305 ntTSL 514.03□□□□□ -0.163e-8■□□□□ 8.7
SRSF1Q07955 GARS-203ENST00000454308 814 ntTSL 518.53■□□□□ 0.564e-8■□□□□ 8.6
SRSF1Q07955 GARS-206ENST00000478124 1877 ntTSL 515.9■□□□□ 0.144e-8■□□□□ 8.6
SRSF1Q07955 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC23.66■■□□□ 1.382e-6■□□□□ 8.6
SRSF1Q07955 AC093323.1-203ENST00000444232 1605 ntTSL 1 (best)20.01■□□□□ 0.792e-6■□□□□ 8.6
SRSF1Q07955 AC093323.1-202ENST00000635031 2045 ntBASIC17.97■□□□□ 0.472e-6■□□□□ 8.6
SRSF1Q07955 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC16.57■□□□□ 0.242e-6■□□□□ 8.6
SRSF1Q07955 CCND1-203ENST00000536559 553 ntTSL 3 BASIC15.9■□□□□ 0.142e-8■□□□□ 8.6
SRSF1Q07955 TTC38-205ENST00000451998 582 ntTSL 214.95□□□□□ -0.022e-6■□□□□ 8.6
SRSF1Q07955 SDHAP3-202ENST00000515467 728 ntBASIC14.52□□□□□ -0.092e-6■□□□□ 8.6
SRSF1Q07955 DAXX-207ENST00000468536 817 ntTSL 213.8□□□□□ -0.22e-8■□□□□ 8.6
SRSF1Q07955 CCND1-204ENST00000539241 920 ntTSL 213.6□□□□□ -0.232e-8■□□□□ 8.6
SRSF1Q07955 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.272e-6■□□□□ 8.6
SRSF1Q07955 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.352e-6■□□□□ 8.6
SRSF1Q07955 CDK8-205ENST00000536792 3032 ntTSL 1 (best)12.83□□□□□ -0.362e-6■□□□□ 8.6
SRSF1Q07955 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.442e-6■□□□□ 8.6
SRSF1Q07955 ZNF276-211ENST00000569582 436 ntTSL 212.17□□□□□ -0.462e-6■□□□□ 8.6
SRSF1Q07955 MUM1-211ENST00000591433 2603 ntTSL 512.16□□□□□ -0.462e-6■□□□□ 8.6
SRSF1Q07955 CCND1-202ENST00000535993 568 ntTSL 211.81□□□□□ -0.522e-8■□□□□ 8.6
SRSF1Q07955 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC11.75□□□□□ -0.532e-6■□□□□ 8.6
SRSF1Q07955 MUM1-205ENST00000587460 2793 ntTSL 1 (best)11.66□□□□□ -0.542e-6■□□□□ 8.6
SRSF1Q07955 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.572e-6■□□□□ 8.6
SRSF1Q07955 DAXX-201ENST00000266000 2606 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.592e-8■□□□□ 8.6
SRSF1Q07955 DAXX-203ENST00000414083 2355 ntTSL 2 BASIC11.18□□□□□ -0.622e-8■□□□□ 8.6
SRSF1Q07955 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC10.84□□□□□ -0.672e-6■□□□□ 8.6
SRSF1Q07955 ABAT-212ENST00000566590 2423 ntTSL 1 (best)10.74□□□□□ -0.692e-6■□□□□ 8.6
SRSF1Q07955 FN1-201ENST00000323926 8708 ntTSL 1 (best) BASIC10.66□□□□□ -0.72e-6■□□□□ 8.6
SRSF1Q07955 DAXX-213ENST00000620164 2462 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.752e-8■□□□□ 8.6
SRSF1Q07955 FN1-202ENST00000336916 8435 ntTSL 1 (best) BASIC10.26□□□□□ -0.772e-6■□□□□ 8.6
SRSF1Q07955 DAXX-202ENST00000374542 2613 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.772e-8■□□□□ 8.6
SRSF1Q07955 FN1-206ENST00000359671 8524 ntTSL 5 BASIC10.08□□□□□ -0.82e-6■□□□□ 8.6
SRSF1Q07955 AP3D1-208ENST00000590683 723 ntTSL 59.78□□□□□ -0.842e-6■□□□□ 8.6
SRSF1Q07955 FN1-212ENST00000446046 7952 ntTSL 1 (best) BASIC9.73□□□□□ -0.852e-6■□□□□ 8.6
SRSF1Q07955 FN1-204ENST00000356005 7846 ntTSL 1 (best) BASIC9.26□□□□□ -0.932e-6■□□□□ 8.6
SRSF1Q07955 FN1-211ENST00000443816 7762 ntTSL 1 (best) BASIC9.26□□□□□ -0.932e-6■□□□□ 8.6
SRSF1Q07955 FN1-207ENST00000421182 8103 ntTSL 1 (best) BASIC9.23□□□□□ -0.932e-6■□□□□ 8.6
SRSF1Q07955 MUM1-214ENST00000591806 4067 ntAPPRIS P2 TSL 1 (best) BASIC9.11□□□□□ -0.952e-6■□□□□ 8.6
SRSF1Q07955 FN1-205ENST00000357867 7898 ntTSL 1 (best) BASIC9.03□□□□□ -0.962e-6■□□□□ 8.6
SRSF1Q07955 FN1-203ENST00000354785 8905 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.982e-6■□□□□ 8.6
SRSF1Q07955 CCND1-201ENST00000227507 4307 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.982e-8■□□□□ 8.6
SRSF1Q07955 ABAT-202ENST00000396600 5586 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.042e-6■□□□□ 8.6
SRSF1Q07955 FN1-216ENST00000469569 629 ntTSL 28.27□□□□□ -1.092e-6■□□□□ 8.6
SRSF1Q07955 FN1-209ENST00000432072 7759 ntTSL 1 (best) BASIC8.11□□□□□ -1.112e-6■□□□□ 8.6
SRSF1Q07955 DAXX-210ENST00000490173 641 ntTSL 1 (best)8.05□□□□□ -1.122e-8■□□□□ 8.6
SRSF1Q07955 TXLNGY-203ENST00000445715 1915 ntBASIC7.94□□□□□ -1.142e-6■□□□□ 8.6
SRSF1Q07955 FN1-225ENST00000494446 676 ntTSL 27.46□□□□□ -1.222e-6■□□□□ 8.6
SRSF1Q07955 DAXX-208ENST00000477162 847 ntTSL 57.39□□□□□ -1.232e-8■□□□□ 8.6
SRSF1Q07955 FN1-218ENST00000473614 568 ntTSL 25.89□□□□□ -1.472e-6■□□□□ 8.6
SRSF1Q07955 FN1-213ENST00000456923 3720 ntTSL 25.76□□□□□ -1.492e-6■□□□□ 8.6
SRSF1Q07955 TXLNGY-209ENST00000585549 378 ntTSL 25.76□□□□□ -1.492e-6■□□□□ 8.6
SRSF1Q07955 TXLNGY-210ENST00000587095 336 ntTSL 25.76□□□□□ -1.492e-6■□□□□ 8.6
SRSF1Q07955 TXLNGY-214ENST00000593000 1074 nt4.74□□□□□ -1.652e-6■□□□□ 8.6
SRSF1Q07955 FN1-224ENST00000492816 9171 ntTSL 54.45□□□□□ -1.72e-6■□□□□ 8.6
SRSF1Q07955 TXLNGY-207ENST00000488280 453 ntTSL 54.25□□□□□ -1.732e-6■□□□□ 8.6
SRSF1Q07955 TXLNGY-211ENST00000588613 699 ntTSL 23.65□□□□□ -1.832e-6■□□□□ 8.6
SRSF1Q07955 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.07□□□□□ -2.082e-6■□□□□ 8.6
SRSF1Q07955 PCED1A-206ENST00000487501 712 ntTSL 310.56□□□□□ -0.729e-10■□□□□ 8.6
SRSF1Q07955 HDHD2-212ENST00000591671 557 ntTSL 217.55■□□□□ 0.41e-6■□□□□ 8.6
SRSF1Q07955 HDHD2-203ENST00000587388 566 ntTSL 316.94■□□□□ 0.31e-6■□□□□ 8.6
SRSF1Q07955 HDHD2-208ENST00000590481 569 ntTSL 416.94■□□□□ 0.31e-6■□□□□ 8.6
SRSF1Q07955 HDHD2-211ENST00000591480 569 ntTSL 415.75■□□□□ 0.111e-6■□□□□ 8.6
SRSF1Q07955 HDHD2-213ENST00000592591 559 ntTSL 415.75■□□□□ 0.111e-6■□□□□ 8.6
SRSF1Q07955 HDHD2-202ENST00000586546 568 ntTSL 414.19□□□□□ -0.141e-6■□□□□ 8.6
SRSF1Q07955 HDHD2-204ENST00000587841 788 ntTSL 314.19□□□□□ -0.141e-6■□□□□ 8.6
SRSF1Q07955 HDHD2-205ENST00000588183 2224 ntTSL 1 (best)12.92□□□□□ -0.341e-6■□□□□ 8.6
SRSF1Q07955 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.41e-6■□□□□ 8.6
SRSF1Q07955 HDHD2-209ENST00000590815 809 ntTSL 312.11□□□□□ -0.471e-6■□□□□ 8.6
SRSF1Q07955 ATP11A-201ENST00000375630 8768 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.71e-6■□□□□ 8.6
SRSF1Q07955 ATP11A-202ENST00000375645 8795 ntAPPRIS P2 TSL 5 BASIC10.42□□□□□ -0.741e-6■□□□□ 8.6
SRSF1Q07955 ATP11A-216ENST00000610419 885 nt9.63□□□□□ -0.871e-6■□□□□ 8.6
SRSF1Q07955 ATP11A-210ENST00000471555 5786 ntTSL 1 (best)9.47□□□□□ -0.891e-6■□□□□ 8.6
SRSF1Q07955 ATP11A-212ENST00000487903 8858 ntAPPRIS P2 TSL 5 BASIC9.01□□□□□ -0.971e-6■□□□□ 8.6
SRSF1Q07955 ATP11A-208ENST00000459908 4516 ntTSL 28.37□□□□□ -1.071e-6■□□□□ 8.6
SRSF1Q07955 ATP11A-204ENST00000418678 3163 ntAPPRIS ALT2 TSL 1 (best)6.18□□□□□ -1.421e-6■□□□□ 8.6
SRSF1Q07955 SRRM2-225ENST00000576076 914 nt14.58□□□□□ -0.083e-8■□□□□ 8.6
Retrieved 100 of 14,836 protein–RNA pairs in 54.4 ms