RNA–Protein interactions for RNA: ENST00000331428.5

XKR3-201, Transcript of XK related 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XKR3, Length 1,690 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XKR3-201ENST00000331428 AEBP2Q6ZN18 517 aaPredicted RBP22.13■■□□□ 1.13
XKR3-201ENST00000331428 CHIC1Q5VXU3 224 aa20.79■□□□□ 0.92
XKR3-201ENST00000331428 SENP3Q9H4L4 574 aaPredicted RBP19.15■□□□□ 0.66
XKR3-201ENST00000331428 PHF23Q9BUL5 403 aaPredicted RBP18.72■□□□□ 0.59
XKR3-201ENST00000331428 POTEDQ86YR6 584 aa18.47■□□□□ 0.55
XKR3-201ENST00000331428 FOXD1Q16676 465 aa17.9■□□□□ 0.46
XKR3-201ENST00000331428 MSH5O43196 834 aa17.23■□□□□ 0.35
XKR3-201ENST00000331428 PIAS4Q8N2W9 510 aaPredicted RBP16.5■□□□□ 0.23
XKR3-201ENST00000331428 PPP6R1Q9UPN7 881 aa15.92■□□□□ 0.14
XKR3-201ENST00000331428 ADRA2BP18089 450 aa15.83■□□□□ 0.12
XKR3-201ENST00000331428 PLPPR3Q6T4P5 718 aa15.64■□□□□ 0.09
XKR3-201ENST00000331428 CACNB1Q02641 598 aaPredicted RBP15.38■□□□□ 0.05
XKR3-201ENST00000331428 DMRT2Q9Y5R5 561 aa15□□□□□ -0.01
XKR3-201ENST00000331428 MAPK8IP2Q13387 824 aaPredicted RBP14.83□□□□□ -0.04
XKR3-201ENST00000331428 SCAF1Q9H7N4 1312 aaKnown RBP14.62□□□□□ -0.07
XKR3-201ENST00000331428 RNF39Q9H2S5 420 aa14.55□□□□□ -0.08
XKR3-201ENST00000331428 DCAF8L1A6NGE4 600 aa14.43□□□□□ -0.1
XKR3-201ENST00000331428 C1QBPQ07021 282 aaKnown RBP14.34□□□□□ -0.11
XKR3-201ENST00000331428 POTEHQ6S545 545 aa14.29□□□□□ -0.12
XKR3-201ENST00000331428 HOXD11P31277 338 aaPredicted RBP14.06□□□□□ -0.16
XKR3-201ENST00000331428 DNAJC5BQ9UF47 199 aa13.84□□□□□ -0.19
XKR3-201ENST00000331428 RNF216Q9NWF9 866 aaPredicted RBP13.69□□□□□ -0.22
XKR3-201ENST00000331428 CNKSR2Q8WXI2 1034 aa13.56□□□□□ -0.24
XKR3-201ENST00000331428 PPP4R3CPQ6ZMV5 832 aa13.56□□□□□ -0.24
XKR3-201ENST00000331428 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.41□□□□□ -0.26
XKR3-201ENST00000331428 DSG3P32926 999 aa13.28□□□□□ -0.28
XKR3-201ENST00000331428 CAPN15O75808 1086 aa13.14□□□□□ -0.31
XKR3-201ENST00000331428 SPINK5Q9NQ38 1064 aaPredicted RBP13.05□□□□□ -0.32
XKR3-201ENST00000331428 U3KPZ7 1027 aaPredicted RBP12.96□□□□□ -0.33
XKR3-201ENST00000331428 SP7Q8TDD2 431 aaPredicted RBP12.93□□□□□ -0.34
XKR3-201ENST00000331428 CHRDL2Q6WN34 429 aa12.84□□□□□ -0.35
XKR3-201ENST00000331428 NCBP3Q53F19 620 aaKnown RBP12.8□□□□□ -0.36
XKR3-201ENST00000331428 RBM42Q9BTD8 480 aaKnown RBP12.79□□□□□ -0.36
XKR3-201ENST00000331428 ABCB7O75027 752 aa12.7□□□□□ -0.38
XKR3-201ENST00000331428 TRHP20396 242 aaPredicted RBP12.67□□□□□ -0.38
XKR3-201ENST00000331428 ZNF219Q9P2Y4 722 aaPredicted RBP12.66□□□□□ -0.38
XKR3-201ENST00000331428 APLP2Q06481 763 aa12.64□□□□□ -0.39
XKR3-201ENST00000331428 NPM3O75607 178 aaKnown RBP12.51□□□□□ -0.41
XKR3-201ENST00000331428 HAX1O00165 279 aa12.38□□□□□ -0.43
XKR3-201ENST00000331428 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.35□□□□□ -0.43
XKR3-201ENST00000331428 HNRNPUL2Q1KMD3 747 aaKnown RBP12.35□□□□□ -0.43
XKR3-201ENST00000331428 PIP4P2Q8N4L2 257 aa12.3□□□□□ -0.44
XKR3-201ENST00000331428 AKT1S1Q96B36 256 aa12.25□□□□□ -0.45
XKR3-201ENST00000331428 SAMD1Q6SPF0 538 aaPredicted RBP12.2□□□□□ -0.46
XKR3-201ENST00000331428 SLC4A2P04920 1241 aa12.19□□□□□ -0.46
XKR3-201ENST00000331428 PLSCR2Q9NRY7 297 aa12.19□□□□□ -0.46
XKR3-201ENST00000331428 LHX8Q68G74 356 aa12.12□□□□□ -0.47
XKR3-201ENST00000331428 POLA2Q14181 598 aa12.1□□□□□ -0.47
XKR3-201ENST00000331428 REM2Q8IYK8 340 aaPredicted RBP12.1□□□□□ -0.47
XKR3-201ENST00000331428 FXR2P51116 673 aaKnown RBP eCLIP12.09□□□□□ -0.47
XKR3-201ENST00000331428 EVX2Q03828 476 aa12.06□□□□□ -0.48
XKR3-201ENST00000331428 PITPNM1O00562 1244 aa11.96□□□□□ -0.5
XKR3-201ENST00000331428 ZBTB12Q9Y330 459 aaPredicted RBP11.86□□□□□ -0.51
XKR3-201ENST00000331428 GABBR2O75899 941 aa11.81□□□□□ -0.52
XKR3-201ENST00000331428 C19orf67A6NJJ6 358 aa11.75□□□□□ -0.53
XKR3-201ENST00000331428 OSCARQ8IYS5 282 aa11.72□□□□□ -0.53
XKR3-201ENST00000331428 PRKAR2AP13861 404 aaKnown RBP11.66□□□□□ -0.54
XKR3-201ENST00000331428 MYCNP04198 464 aaPredicted RBP11.65□□□□□ -0.54
XKR3-201ENST00000331428 POTEIP0CG38 1075 aa11.5□□□□□ -0.57
XKR3-201ENST00000331428 POTEMA6NI47 508 aa11.44□□□□□ -0.58
XKR3-201ENST00000331428 SPDYE1Q8NFV5 336 aaPredicted RBP11.43□□□□□ -0.58
XKR3-201ENST00000331428 CLEC11AQ9Y240 323 aa11.43□□□□□ -0.58
XKR3-201ENST00000331428 PCDH10Q9P2E7 1040 aa11.42□□□□□ -0.58
XKR3-201ENST00000331428 CLCN6P51797 869 aa11.39□□□□□ -0.59
XKR3-201ENST00000331428 SPDYE2BA6NHP3 402 aa11.38□□□□□ -0.59
XKR3-201ENST00000331428 SPDYE6P0CI01 402 aa11.38□□□□□ -0.59
XKR3-201ENST00000331428 SPDYE2Q495Y8 402 aa11.38□□□□□ -0.59
XKR3-201ENST00000331428 POTEGQ6S5H5 508 aa11.38□□□□□ -0.59
XKR3-201ENST00000331428 ATF5Q9Y2D1 282 aaPredicted RBP11.36□□□□□ -0.59
XKR3-201ENST00000331428 KCNA4P22459 653 aa11.34□□□□□ -0.59
XKR3-201ENST00000331428 DCBLD2Q96PD2 775 aa11.31□□□□□ -0.6
XKR3-201ENST00000331428 OTUD5Q96G74 571 aa11.29□□□□□ -0.6
XKR3-201ENST00000331428 CHADLQ6NUI6 762 aa11.27□□□□□ -0.61
XKR3-201ENST00000331428 CD44P16070 742 aaKnown RBP11.24□□□□□ -0.61
XKR3-201ENST00000331428 EHMT2Q96KQ7 1210 aa11.13□□□□□ -0.63
XKR3-201ENST00000331428 FBLN2P98095 1184 aa11.12□□□□□ -0.63
XKR3-201ENST00000331428 PRR29P0C7W0 189 aa11.11□□□□□ -0.63
XKR3-201ENST00000331428 POTEB2H3BUK9 544 aa11.08□□□□□ -0.64
XKR3-201ENST00000331428 SSUH2Q9Y2M2 353 aa11.08□□□□□ -0.64
XKR3-201ENST00000331428 ZNF692Q9BU19 519 aaPredicted RBP11.05□□□□□ -0.64
XKR3-201ENST00000331428 FARP1Q9Y4F1 1045 aaPredicted RBP11.04□□□□□ -0.64
XKR3-201ENST00000331428 ZNF579Q8NAF0 562 aaKnown RBP11.02□□□□□ -0.64
XKR3-201ENST00000331428 FOXD4L1Q9NU39 408 aa10.97□□□□□ -0.65
XKR3-201ENST00000331428 ZRANB1Q9UGI0 708 aa10.92□□□□□ -0.66
XKR3-201ENST00000331428 GALR2O43603 387 aaPredicted RBP10.91□□□□□ -0.66
XKR3-201ENST00000331428 MAMSTRQ6ZN01 415 aa10.89□□□□□ -0.67
XKR3-201ENST00000331428 FAM163AQ96GL9 167 aaPredicted RBP10.89□□□□□ -0.67
XKR3-201ENST00000331428 LCE2DQ5TA82 110 aaPredicted RBP10.89□□□□□ -0.67
XKR3-201ENST00000331428 SLC4A1APQ9BWU0 796 aaKnown RBP10.88□□□□□ -0.67
XKR3-201ENST00000331428 PABPN1Q86U42 306 aaKnown RBP eCLIP10.83□□□□□ -0.68
XKR3-201ENST00000331428 MKRN4PQ13434 485 aaPredicted RBP10.8□□□□□ -0.68
XKR3-201ENST00000331428 ATXN8OSP0DMR3 200 aa10.78□□□□□ -0.68
XKR3-201ENST00000331428 PELP1Q8IZL8 1130 aaKnown RBP10.78□□□□□ -0.68
XKR3-201ENST00000331428 CDAN1Q8IWY9 1227 aa10.76□□□□□ -0.69
XKR3-201ENST00000331428 POTEJP0CG39 1038 aa10.76□□□□□ -0.69
XKR3-201ENST00000331428 CSRNP3Q8WYN3 585 aa10.76□□□□□ -0.69
XKR3-201ENST00000331428 METRNQ9UJH8 293 aa10.76□□□□□ -0.69
XKR3-201ENST00000331428 C7P10643 843 aa10.74□□□□□ -0.69
XKR3-201ENST00000331428 SCUBE2Q9NQ36 999 aa10.74□□□□□ -0.69
XKR3-201ENST00000331428 SLC39A7Q92504 469 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms