Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDC42P60953 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CDC42P60953 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.05■□□□□ 0.16
CDC42P60953 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC16.05■□□□□ 0.16
CDC42P60953 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CDC42P60953 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CDC42P60953 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDC42P60953 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC16.04■□□□□ 0.16
CDC42P60953 BX276092.7-203ENST00000637198 1536 ntBASIC16.04■□□□□ 0.16
CDC42P60953 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDC42P60953 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC16.04■□□□□ 0.16
CDC42P60953 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC16.04■□□□□ 0.16
CDC42P60953 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDC42P60953 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDC42P60953 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDC42P60953 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
CDC42P60953 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC16.04■□□□□ 0.16
CDC42P60953 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.04■□□□□ 0.16
CDC42P60953 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.04■□□□□ 0.16
CDC42P60953 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDC42P60953 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDC42P60953 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16.04■□□□□ 0.16
CDC42P60953 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CDC42P60953 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
CDC42P60953 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC16.04■□□□□ 0.16
CDC42P60953 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDC42P60953 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC16.04■□□□□ 0.16
CDC42P60953 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CDC42P60953 AC113404.2-201ENST00000507884 177 ntBASIC16.04■□□□□ 0.16
CDC42P60953 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CDC42P60953 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDC42P60953 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC16.04■□□□□ 0.16
CDC42P60953 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDC42P60953 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC16.04■□□□□ 0.16
CDC42P60953 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC16.04■□□□□ 0.16
CDC42P60953 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CDC42P60953 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDC42P60953 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDC42P60953 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
CDC42P60953 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC16.04■□□□□ 0.16
CDC42P60953 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDC42P60953 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CDC42P60953 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC16.04■□□□□ 0.16
CDC42P60953 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDC42P60953 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDC42P60953 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CDC42P60953 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
CDC42P60953 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDC42P60953 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDC42P60953 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDC42P60953 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDC42P60953 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDC42P60953 LINC01311-201ENST00000565162 1445 ntBASIC16.03■□□□□ 0.16
CDC42P60953 AC092338.2-201ENST00000568827 1415 ntBASIC16.03■□□□□ 0.16
CDC42P60953 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC16.03■□□□□ 0.16
CDC42P60953 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
CDC42P60953 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDC42P60953 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC16.03■□□□□ 0.16
CDC42P60953 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDC42P60953 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDC42P60953 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDC42P60953 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC16.03■□□□□ 0.16
CDC42P60953 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CDC42P60953 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDC42P60953 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CDC42P60953 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC16.03■□□□□ 0.16
CDC42P60953 SEC1P-202ENST00000473944 940 ntBASIC16.03■□□□□ 0.16
CDC42P60953 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CDC42P60953 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC16.03■□□□□ 0.16
CDC42P60953 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC16.03■□□□□ 0.16
CDC42P60953 AP001412.1-201ENST00000608405 714 ntBASIC16.03■□□□□ 0.16
CDC42P60953 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDC42P60953 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC16.03■□□□□ 0.16
CDC42P60953 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDC42P60953 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDC42P60953 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC16.03■□□□□ 0.16
CDC42P60953 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
CDC42P60953 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDC42P60953 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDC42P60953 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CDC42P60953 PBK-203ENST00000522944 1499 ntTSL 2 BASIC16.03■□□□□ 0.16
CDC42P60953 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CDC42P60953 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CDC42P60953 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CDC42P60953 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDC42P60953 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC16.02■□□□□ 0.16
CDC42P60953 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CDC42P60953 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CDC42P60953 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
CDC42P60953 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC16.02■□□□□ 0.16
CDC42P60953 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CDC42P60953 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.02■□□□□ 0.16
CDC42P60953 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CDC42P60953 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.16
CDC42P60953 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CDC42P60953 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
CDC42P60953 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CDC42P60953 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC16.02■□□□□ 0.16
CDC42P60953 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CDC42P60953 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC16.02■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms