Protein–RNA interactions for Protein: P56817

BACE1, Beta-secretase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BACE1P56817 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC20.08■□□□□ 0.81
BACE1P56817 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC20.08■□□□□ 0.81
BACE1P56817 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
BACE1P56817 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC20.08■□□□□ 0.81
BACE1P56817 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC20.08■□□□□ 0.81
BACE1P56817 AC004835.2-201ENST00000603762 682 ntBASIC20.08■□□□□ 0.81
BACE1P56817 REXO1L3P-201ENST00000622202 1288 ntBASIC20.08■□□□□ 0.81
BACE1P56817 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC20.08■□□□□ 0.8
BACE1P56817 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
BACE1P56817 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
BACE1P56817 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
BACE1P56817 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC20.07■□□□□ 0.8
BACE1P56817 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
BACE1P56817 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
BACE1P56817 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC20.07■□□□□ 0.8
BACE1P56817 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC20.07■□□□□ 0.8
BACE1P56817 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
BACE1P56817 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC20.07■□□□□ 0.8
BACE1P56817 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
BACE1P56817 AC092919.2-201ENST00000623631 1645 ntBASIC20.07■□□□□ 0.8
BACE1P56817 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
BACE1P56817 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
BACE1P56817 AC004461.1-201ENST00000412461 403 ntBASIC20.07■□□□□ 0.8
BACE1P56817 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC20.07■□□□□ 0.8
BACE1P56817 AL513480.1-201ENST00000451731 511 ntBASIC20.07■□□□□ 0.8
BACE1P56817 SLC25A6P2-201ENST00000497974 877 ntBASIC20.07■□□□□ 0.8
BACE1P56817 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC20.07■□□□□ 0.8
BACE1P56817 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC20.07■□□□□ 0.8
BACE1P56817 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
BACE1P56817 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC20.07■□□□□ 0.8
BACE1P56817 AL139327.4-201ENST00000612362 153 ntBASIC20.07■□□□□ 0.8
BACE1P56817 AC106028.4-201ENST00000614509 607 ntBASIC20.07■□□□□ 0.8
BACE1P56817 AC093028.1-201ENST00000622998 982 ntBASIC20.07■□□□□ 0.8
BACE1P56817 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC20.07■□□□□ 0.8
BACE1P56817 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC20.07■□□□□ 0.8
BACE1P56817 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
BACE1P56817 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC20.07■□□□□ 0.8
BACE1P56817 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
BACE1P56817 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
BACE1P56817 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
BACE1P56817 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
BACE1P56817 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
BACE1P56817 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
BACE1P56817 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
BACE1P56817 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
BACE1P56817 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC20.07■□□□□ 0.8
BACE1P56817 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC20.06■□□□□ 0.8
BACE1P56817 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
BACE1P56817 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
BACE1P56817 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.06■□□□□ 0.8
BACE1P56817 AL121761.2-201ENST00000598007 1648 ntBASIC20.06■□□□□ 0.8
BACE1P56817 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
BACE1P56817 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
BACE1P56817 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
BACE1P56817 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC20.06■□□□□ 0.8
BACE1P56817 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
BACE1P56817 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
BACE1P56817 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC20.06■□□□□ 0.8
BACE1P56817 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC20.06■□□□□ 0.8
BACE1P56817 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
BACE1P56817 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC20.06■□□□□ 0.8
BACE1P56817 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC20.06■□□□□ 0.8
BACE1P56817 AC006116.8-202ENST00000587620 1550 ntBASIC20.06■□□□□ 0.8
BACE1P56817 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC20.06■□□□□ 0.8
BACE1P56817 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC20.06■□□□□ 0.8
BACE1P56817 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
BACE1P56817 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
BACE1P56817 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
BACE1P56817 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
BACE1P56817 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
BACE1P56817 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC20.05■□□□□ 0.8
BACE1P56817 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC20.05■□□□□ 0.8
BACE1P56817 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
BACE1P56817 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
BACE1P56817 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
BACE1P56817 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
BACE1P56817 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
BACE1P56817 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC20.05■□□□□ 0.8
BACE1P56817 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC20.05■□□□□ 0.8
BACE1P56817 AC087163.2-201ENST00000457299 853 ntBASIC20.05■□□□□ 0.8
BACE1P56817 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
BACE1P56817 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC20.05■□□□□ 0.8
BACE1P56817 MIR3197-201ENST00000582241 73 ntBASIC20.05■□□□□ 0.8
BACE1P56817 TK1-204ENST00000590430 683 ntTSL 3 BASIC20.05■□□□□ 0.8
BACE1P56817 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC20.05■□□□□ 0.8
BACE1P56817 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC20.05■□□□□ 0.8
BACE1P56817 PODN-203ENST00000395871 2744 ntTSL 5 BASIC20.05■□□□□ 0.8
BACE1P56817 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC20.05■□□□□ 0.8
BACE1P56817 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC20.05■□□□□ 0.8
BACE1P56817 GOLGA6L17P-202ENST00000614358 1398 ntBASIC20.05■□□□□ 0.8
BACE1P56817 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
BACE1P56817 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
BACE1P56817 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC20.04■□□□□ 0.8
BACE1P56817 AC129492.6-201ENST00000611383 1305 ntBASIC20.04■□□□□ 0.8
BACE1P56817 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC20.04■□□□□ 0.8
BACE1P56817 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
BACE1P56817 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
BACE1P56817 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
BACE1P56817 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC20.04■□□□□ 0.8
BACE1P56817 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms