Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC15.68■□□□□ 0.1
GFRA1P56159 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC15.68■□□□□ 0.1
GFRA1P56159 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC15.68■□□□□ 0.1
GFRA1P56159 AC092910.1-201ENST00000482027 1129 ntBASIC15.68■□□□□ 0.1
GFRA1P56159 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
GFRA1P56159 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC15.68■□□□□ 0.1
GFRA1P56159 CD63-204ENST00000546939 779 ntTSL 3 BASIC15.68■□□□□ 0.1
GFRA1P56159 RPS29-206ENST00000557111 488 ntTSL 2 BASIC15.68■□□□□ 0.1
GFRA1P56159 ETFA-208ENST00000559602 792 ntTSL 3 BASIC15.68■□□□□ 0.1
GFRA1P56159 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC15.68■□□□□ 0.1
GFRA1P56159 TK1-204ENST00000590430 683 ntTSL 3 BASIC15.68■□□□□ 0.1
GFRA1P56159 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
GFRA1P56159 NME4-212ENST00000621774 904 ntTSL 3 BASIC15.68■□□□□ 0.1
GFRA1P56159 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC15.68■□□□□ 0.1
GFRA1P56159 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
GFRA1P56159 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
GFRA1P56159 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC15.68■□□□□ 0.1
GFRA1P56159 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
GFRA1P56159 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC15.68■□□□□ 0.1
GFRA1P56159 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
GFRA1P56159 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC15.68■□□□□ 0.1
GFRA1P56159 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC15.68■□□□□ 0.1
GFRA1P56159 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
GFRA1P56159 AC007613.1-201ENST00000572811 2597 ntBASIC15.68■□□□□ 0.1
GFRA1P56159 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
GFRA1P56159 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC15.67■□□□□ 0.1
GFRA1P56159 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
GFRA1P56159 AC097637.2-201ENST00000624096 1997 ntBASIC15.67■□□□□ 0.1
GFRA1P56159 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
GFRA1P56159 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
GFRA1P56159 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
GFRA1P56159 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
GFRA1P56159 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
GFRA1P56159 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
GFRA1P56159 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
GFRA1P56159 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
GFRA1P56159 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
GFRA1P56159 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
GFRA1P56159 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC15.67■□□□□ 0.1
GFRA1P56159 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
GFRA1P56159 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
GFRA1P56159 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
GFRA1P56159 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
GFRA1P56159 CENPM-204ENST00000402420 688 ntTSL 5 BASIC15.67■□□□□ 0.1
GFRA1P56159 AC098831.1-202ENST00000438821 336 ntBASIC15.67■□□□□ 0.1
GFRA1P56159 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC15.67■□□□□ 0.1
GFRA1P56159 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC15.67■□□□□ 0.1
GFRA1P56159 ARTN-206ENST00000472435 402 ntTSL 3 BASIC15.67■□□□□ 0.1
GFRA1P56159 SLC25A1P1-201ENST00000528351 927 ntBASIC15.67■□□□□ 0.1
GFRA1P56159 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC15.67■□□□□ 0.1
GFRA1P56159 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC15.67■□□□□ 0.1
GFRA1P56159 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC15.67■□□□□ 0.1
GFRA1P56159 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC15.67■□□□□ 0.1
GFRA1P56159 AL356488.2-201ENST00000602755 427 ntBASIC15.67■□□□□ 0.1
GFRA1P56159 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC15.67■□□□□ 0.1
GFRA1P56159 LETM1P2-201ENST00000597330 2178 ntBASIC15.67■□□□□ 0.1
GFRA1P56159 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
GFRA1P56159 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
GFRA1P56159 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC15.67■□□□□ 0.1
GFRA1P56159 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC15.67■□□□□ 0.1
GFRA1P56159 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
GFRA1P56159 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
GFRA1P56159 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
GFRA1P56159 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC15.67■□□□□ 0.1
GFRA1P56159 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
GFRA1P56159 LYSMD4-203ENST00000378904 2122 ntBASIC15.67■□□□□ 0.1
GFRA1P56159 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
GFRA1P56159 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
GFRA1P56159 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
GFRA1P56159 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
GFRA1P56159 NOC2LP2-201ENST00000407594 1944 ntBASIC15.66■□□□□ 0.1
GFRA1P56159 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
GFRA1P56159 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
GFRA1P56159 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
GFRA1P56159 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
GFRA1P56159 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
GFRA1P56159 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
GFRA1P56159 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
GFRA1P56159 AC134043.2-201ENST00000624206 2238 ntBASIC15.66■□□□□ 0.1
GFRA1P56159 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
GFRA1P56159 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
GFRA1P56159 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
GFRA1P56159 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC15.66■□□□□ 0.1
GFRA1P56159 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
GFRA1P56159 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC15.66■□□□□ 0.1
GFRA1P56159 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC15.66■□□□□ 0.1
GFRA1P56159 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
GFRA1P56159 RPL18-209ENST00000550645 463 ntTSL 5 BASIC15.66■□□□□ 0.1
GFRA1P56159 RPL18-214ENST00000552588 559 ntTSL 3 BASIC15.66■□□□□ 0.1
GFRA1P56159 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC15.66■□□□□ 0.1
GFRA1P56159 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
GFRA1P56159 AL139424.1-201ENST00000607572 797 ntBASIC15.66■□□□□ 0.1
GFRA1P56159 AC117500.6-201ENST00000624871 588 ntBASIC15.66■□□□□ 0.1
GFRA1P56159 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
GFRA1P56159 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC15.66■□□□□ 0.1
GFRA1P56159 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC15.66■□□□□ 0.1
GFRA1P56159 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC15.66■□□□□ 0.1
GFRA1P56159 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC15.66■□□□□ 0.1
GFRA1P56159 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC15.66■□□□□ 0.1
GFRA1P56159 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms