Protein–RNA interactions for Protein: P54760

EPHB4, Ephrin type-B receptor 4, humanhuman

Predictions only

Length 987 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4P54760 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
EPHB4P54760 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC19.7■□□□□ 0.74
EPHB4P54760 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC19.7■□□□□ 0.74
EPHB4P54760 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC19.7■□□□□ 0.74
EPHB4P54760 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC19.7■□□□□ 0.74
EPHB4P54760 KRT18P41-201ENST00000518924 1277 ntBASIC19.7■□□□□ 0.74
EPHB4P54760 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC19.7■□□□□ 0.74
EPHB4P54760 COX5A-206ENST00000568783 571 ntTSL 3 BASIC19.7■□□□□ 0.74
EPHB4P54760 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC19.7■□□□□ 0.74
EPHB4P54760 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC19.7■□□□□ 0.74
EPHB4P54760 AC092364.2-202ENST00000597012 1073 ntBASIC19.7■□□□□ 0.74
EPHB4P54760 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC19.7■□□□□ 0.74
EPHB4P54760 AC009154.2-201ENST00000621177 724 ntBASIC19.7■□□□□ 0.74
EPHB4P54760 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
EPHB4P54760 NFYC-AS1-201ENST00000606277 1687 ntBASIC19.7■□□□□ 0.74
EPHB4P54760 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
EPHB4P54760 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
EPHB4P54760 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
EPHB4P54760 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
EPHB4P54760 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC19.7■□□□□ 0.74
EPHB4P54760 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
EPHB4P54760 MTMR9LP-203ENST00000426597 1545 ntBASIC19.7■□□□□ 0.74
EPHB4P54760 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC19.7■□□□□ 0.74
EPHB4P54760 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
EPHB4P54760 PRORSD1P-202ENST00000563365 2154 ntBASIC19.7■□□□□ 0.74
EPHB4P54760 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
EPHB4P54760 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
EPHB4P54760 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
EPHB4P54760 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
EPHB4P54760 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
EPHB4P54760 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC19.69■□□□□ 0.74
EPHB4P54760 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC19.69■□□□□ 0.74
EPHB4P54760 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
EPHB4P54760 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
EPHB4P54760 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
EPHB4P54760 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
EPHB4P54760 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
EPHB4P54760 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
EPHB4P54760 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
EPHB4P54760 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
EPHB4P54760 SOD2-201ENST00000337404 991 ntTSL 2 BASIC19.69■□□□□ 0.74
EPHB4P54760 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
EPHB4P54760 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
EPHB4P54760 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
EPHB4P54760 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC19.69■□□□□ 0.74
EPHB4P54760 LAGE3P1-201ENST00000425356 484 ntBASIC19.69■□□□□ 0.74
EPHB4P54760 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC19.69■□□□□ 0.74
EPHB4P54760 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
EPHB4P54760 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC19.69■□□□□ 0.74
EPHB4P54760 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC19.69■□□□□ 0.74
EPHB4P54760 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC19.69■□□□□ 0.74
EPHB4P54760 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
EPHB4P54760 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
EPHB4P54760 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
EPHB4P54760 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
EPHB4P54760 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
EPHB4P54760 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
EPHB4P54760 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC19.69■□□□□ 0.74
EPHB4P54760 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
EPHB4P54760 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
EPHB4P54760 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
EPHB4P54760 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
EPHB4P54760 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
EPHB4P54760 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC19.68■□□□□ 0.74
EPHB4P54760 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC19.68■□□□□ 0.74
EPHB4P54760 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
EPHB4P54760 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC19.68■□□□□ 0.74
EPHB4P54760 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
EPHB4P54760 MIR149-201ENST00000384879 89 ntBASIC19.68■□□□□ 0.74
EPHB4P54760 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC19.68■□□□□ 0.74
EPHB4P54760 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC19.68■□□□□ 0.74
EPHB4P54760 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC19.68■□□□□ 0.74
EPHB4P54760 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC19.68■□□□□ 0.74
EPHB4P54760 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC19.68■□□□□ 0.74
EPHB4P54760 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC19.68■□□□□ 0.74
EPHB4P54760 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC19.68■□□□□ 0.74
EPHB4P54760 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
EPHB4P54760 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
EPHB4P54760 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC19.68■□□□□ 0.74
EPHB4P54760 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
EPHB4P54760 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
EPHB4P54760 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
EPHB4P54760 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
EPHB4P54760 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC19.68■□□□□ 0.74
EPHB4P54760 HEIH-201ENST00000623091 1652 ntBASIC19.68■□□□□ 0.74
EPHB4P54760 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC19.68■□□□□ 0.74
EPHB4P54760 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
EPHB4P54760 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
EPHB4P54760 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC19.68■□□□□ 0.74
EPHB4P54760 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC19.68■□□□□ 0.74
EPHB4P54760 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
EPHB4P54760 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC19.67■□□□□ 0.74
EPHB4P54760 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
EPHB4P54760 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
EPHB4P54760 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
EPHB4P54760 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC19.67■□□□□ 0.74
EPHB4P54760 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
EPHB4P54760 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC19.67■□□□□ 0.74
EPHB4P54760 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
EPHB4P54760 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms