Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
CEACAM3P40198 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.11
CEACAM3P40198 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
CEACAM3P40198 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CEACAM3P40198 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CEACAM3P40198 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
CEACAM3P40198 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
CEACAM3P40198 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
CEACAM3P40198 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
CEACAM3P40198 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC14.33□□□□□ -0.12
CEACAM3P40198 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
CEACAM3P40198 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
CEACAM3P40198 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC14.33□□□□□ -0.12
CEACAM3P40198 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CEACAM3P40198 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
CEACAM3P40198 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CEACAM3P40198 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
CEACAM3P40198 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CEACAM3P40198 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC14.33□□□□□ -0.12
CEACAM3P40198 NUS1P2-201ENST00000417358 873 ntBASIC14.33□□□□□ -0.12
CEACAM3P40198 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CEACAM3P40198 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC14.33□□□□□ -0.12
CEACAM3P40198 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC14.33□□□□□ -0.12
CEACAM3P40198 AC002558.1-201ENST00000488906 803 ntBASIC14.33□□□□□ -0.12
CEACAM3P40198 KRT18P56-201ENST00000507275 550 ntBASIC14.33□□□□□ -0.12
CEACAM3P40198 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
CEACAM3P40198 PXK-206ENST00000463280 2825 ntTSL 2 BASIC14.33□□□□□ -0.12
CEACAM3P40198 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CEACAM3P40198 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
CEACAM3P40198 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
CEACAM3P40198 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC14.33□□□□□ -0.12
CEACAM3P40198 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC14.33□□□□□ -0.12
CEACAM3P40198 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC14.33□□□□□ -0.12
CEACAM3P40198 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
CEACAM3P40198 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CEACAM3P40198 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CEACAM3P40198 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
CEACAM3P40198 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC14.33□□□□□ -0.12
CEACAM3P40198 AC018470.1-201ENST00000624790 3129 ntBASIC14.32□□□□□ -0.12
CEACAM3P40198 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CEACAM3P40198 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CEACAM3P40198 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC14.32□□□□□ -0.12
CEACAM3P40198 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
CEACAM3P40198 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CEACAM3P40198 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC14.32□□□□□ -0.12
CEACAM3P40198 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CEACAM3P40198 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC14.32□□□□□ -0.12
CEACAM3P40198 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CEACAM3P40198 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC14.32□□□□□ -0.12
CEACAM3P40198 AC010460.3-201ENST00000511359 1579 ntBASIC14.32□□□□□ -0.12
CEACAM3P40198 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC14.32□□□□□ -0.12
CEACAM3P40198 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CEACAM3P40198 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CEACAM3P40198 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CEACAM3P40198 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
CEACAM3P40198 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
CEACAM3P40198 SRP19-202ENST00000445150 833 ntTSL 2 BASIC14.32□□□□□ -0.12
CEACAM3P40198 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
CEACAM3P40198 AC091607.1-201ENST00000490318 1060 ntBASIC14.32□□□□□ -0.12
CEACAM3P40198 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CEACAM3P40198 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC14.32□□□□□ -0.12
CEACAM3P40198 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC14.32□□□□□ -0.12
CEACAM3P40198 BNIP3P18-201ENST00000593976 575 ntBASIC14.32□□□□□ -0.12
CEACAM3P40198 AC138894.3-201ENST00000603787 634 ntBASIC14.32□□□□□ -0.12
CEACAM3P40198 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC14.32□□□□□ -0.12
CEACAM3P40198 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC14.32□□□□□ -0.12
CEACAM3P40198 CCNC-219ENST00000627680 896 ntTSL 5 BASIC14.32□□□□□ -0.12
CEACAM3P40198 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
CEACAM3P40198 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
CEACAM3P40198 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CEACAM3P40198 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
CEACAM3P40198 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CEACAM3P40198 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC14.32□□□□□ -0.12
CEACAM3P40198 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC14.32□□□□□ -0.12
CEACAM3P40198 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
CEACAM3P40198 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CEACAM3P40198 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CEACAM3P40198 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
CEACAM3P40198 AC012317.2-201ENST00000623305 2251 ntBASIC14.31□□□□□ -0.12
CEACAM3P40198 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC14.31□□□□□ -0.12
CEACAM3P40198 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CEACAM3P40198 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
CEACAM3P40198 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
CEACAM3P40198 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CEACAM3P40198 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CEACAM3P40198 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
CEACAM3P40198 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CEACAM3P40198 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CEACAM3P40198 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CEACAM3P40198 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CEACAM3P40198 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
CEACAM3P40198 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CEACAM3P40198 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CEACAM3P40198 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CEACAM3P40198 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CEACAM3P40198 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CEACAM3P40198 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC14.31□□□□□ -0.12
CEACAM3P40198 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
CEACAM3P40198 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC14.31□□□□□ -0.12
CEACAM3P40198 FICD-205ENST00000552758 603 ntTSL 2 BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms