Protein–RNA interactions for Protein: P26022

PTX3, Pentraxin-related protein PTX3, humanhuman

Predicted RBP Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3P26022 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PTX3P26022 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PTX3P26022 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PTX3P26022 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC16.83■□□□□ 0.28
PTX3P26022 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
PTX3P26022 MIR1224-201ENST00000408193 85 ntBASIC16.83■□□□□ 0.28
PTX3P26022 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC16.83■□□□□ 0.28
PTX3P26022 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
PTX3P26022 MEG3-211ENST00000452514 461 ntTSL 3 BASIC16.83■□□□□ 0.28
PTX3P26022 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC16.83■□□□□ 0.28
PTX3P26022 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC16.83■□□□□ 0.28
PTX3P26022 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC16.83■□□□□ 0.28
PTX3P26022 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC16.83■□□□□ 0.28
PTX3P26022 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
PTX3P26022 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC16.83■□□□□ 0.28
PTX3P26022 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PTX3P26022 TPM1-226ENST00000560959 925 ntTSL 2 BASIC16.83■□□□□ 0.28
PTX3P26022 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC16.83■□□□□ 0.28
PTX3P26022 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
PTX3P26022 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC16.83■□□□□ 0.28
PTX3P26022 AC233702.3-201ENST00000578656 1387 ntBASIC16.83■□□□□ 0.28
PTX3P26022 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC16.83■□□□□ 0.28
PTX3P26022 Z69720.1-201ENST00000601483 472 ntBASIC16.83■□□□□ 0.28
PTX3P26022 AL445228.2-201ENST00000605589 952 ntBASIC16.83■□□□□ 0.28
PTX3P26022 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PTX3P26022 AC010331.1-201ENST00000611423 582 ntBASIC16.83■□□□□ 0.28
PTX3P26022 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC16.83■□□□□ 0.28
PTX3P26022 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
PTX3P26022 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
PTX3P26022 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
PTX3P26022 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PTX3P26022 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PTX3P26022 AC009053.2-201ENST00000563701 2365 ntBASIC16.82■□□□□ 0.28
PTX3P26022 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC16.82■□□□□ 0.28
PTX3P26022 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PTX3P26022 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PTX3P26022 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC16.82■□□□□ 0.28
PTX3P26022 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
PTX3P26022 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
PTX3P26022 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC16.82■□□□□ 0.28
PTX3P26022 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PTX3P26022 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PTX3P26022 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PTX3P26022 AC016396.2-201ENST00000562575 1417 ntBASIC16.82■□□□□ 0.28
PTX3P26022 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC16.82■□□□□ 0.28
PTX3P26022 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC16.82■□□□□ 0.28
PTX3P26022 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC16.82■□□□□ 0.28
PTX3P26022 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC16.82■□□□□ 0.28
PTX3P26022 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC16.82■□□□□ 0.28
PTX3P26022 CCS-201ENST00000310190 942 ntTSL 5 BASIC16.82■□□□□ 0.28
PTX3P26022 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PTX3P26022 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PTX3P26022 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC16.82■□□□□ 0.28
PTX3P26022 PPIH-202ENST00000372549 327 ntTSL 3 BASIC16.82■□□□□ 0.28
PTX3P26022 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
PTX3P26022 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PTX3P26022 AP002383.4-201ENST00000442518 975 ntBASIC16.82■□□□□ 0.28
PTX3P26022 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC16.82■□□□□ 0.28
PTX3P26022 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC16.82■□□□□ 0.28
PTX3P26022 AP002414.4-201ENST00000589764 1148 ntBASIC16.82■□□□□ 0.28
PTX3P26022 IL11-204ENST00000590625 1028 ntTSL 2 BASIC16.82■□□□□ 0.28
PTX3P26022 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC16.82■□□□□ 0.28
PTX3P26022 AL139327.4-201ENST00000612362 153 ntBASIC16.82■□□□□ 0.28
PTX3P26022 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PTX3P26022 TPR-209ENST00000613151 2478 ntTSL 5 BASIC16.82■□□□□ 0.28
PTX3P26022 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PTX3P26022 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PTX3P26022 LYSMD4-203ENST00000378904 2122 ntBASIC16.82■□□□□ 0.28
PTX3P26022 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PTX3P26022 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
PTX3P26022 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
PTX3P26022 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC16.82■□□□□ 0.28
PTX3P26022 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
PTX3P26022 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PTX3P26022 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC16.82■□□□□ 0.28
PTX3P26022 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
PTX3P26022 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PTX3P26022 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC16.81■□□□□ 0.28
PTX3P26022 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PTX3P26022 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC16.81■□□□□ 0.28
PTX3P26022 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
PTX3P26022 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PTX3P26022 AC108860.2-201ENST00000562760 2183 ntBASIC16.81■□□□□ 0.28
PTX3P26022 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC16.81■□□□□ 0.28
PTX3P26022 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC16.81■□□□□ 0.28
PTX3P26022 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PTX3P26022 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PTX3P26022 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PTX3P26022 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
PTX3P26022 CD9-202ENST00000382515 1229 ntTSL 5 BASIC16.81■□□□□ 0.28
PTX3P26022 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
PTX3P26022 COPS8-203ENST00000409334 794 ntTSL 5 BASIC16.81■□□□□ 0.28
PTX3P26022 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC16.81■□□□□ 0.28
PTX3P26022 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC16.81■□□□□ 0.28
PTX3P26022 CIB2-208ENST00000560618 804 ntTSL 2 BASIC16.81■□□□□ 0.28
PTX3P26022 TPSP2-201ENST00000561760 610 ntBASIC16.81■□□□□ 0.28
PTX3P26022 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PTX3P26022 NT5C-211ENST00000582170 653 ntTSL 3 BASIC16.81■□□□□ 0.28
PTX3P26022 AC069148.1-201ENST00000608741 768 ntBASIC16.81■□□□□ 0.28
PTX3P26022 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms