Protein–RNA interactions for Protein: P17980

PSMC3, 26S proteasome regulatory subunit 6A, humanhuman

Predictions only

Length 439 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC3P17980 AC064836.3-201ENST00000607928 673 ntBASIC18.28■□□□□ 0.52
PSMC3P17980 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
PSMC3P17980 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC18.28■□□□□ 0.52
PSMC3P17980 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PSMC3P17980 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC18.28■□□□□ 0.52
PSMC3P17980 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PSMC3P17980 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC18.28■□□□□ 0.52
PSMC3P17980 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
PSMC3P17980 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PSMC3P17980 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
PSMC3P17980 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC18.28■□□□□ 0.52
PSMC3P17980 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PSMC3P17980 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.28■□□□□ 0.52
PSMC3P17980 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
PSMC3P17980 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PSMC3P17980 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PSMC3P17980 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
PSMC3P17980 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
PSMC3P17980 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
PSMC3P17980 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.52
PSMC3P17980 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PSMC3P17980 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.27■□□□□ 0.52
PSMC3P17980 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC18.27■□□□□ 0.52
PSMC3P17980 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PSMC3P17980 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
PSMC3P17980 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PSMC3P17980 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC18.27■□□□□ 0.52
PSMC3P17980 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
PSMC3P17980 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
PSMC3P17980 PMS2P2-201ENST00000425039 1128 ntBASIC18.27■□□□□ 0.52
PSMC3P17980 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PSMC3P17980 AC108751.1-201ENST00000490852 363 ntBASIC18.27■□□□□ 0.52
PSMC3P17980 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC18.27■□□□□ 0.52
PSMC3P17980 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PSMC3P17980 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC18.27■□□□□ 0.52
PSMC3P17980 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC18.27■□□□□ 0.52
PSMC3P17980 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC18.27■□□□□ 0.52
PSMC3P17980 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC18.27■□□□□ 0.52
PSMC3P17980 AL589182.2-201ENST00000619332 1049 ntBASIC18.27■□□□□ 0.52
PSMC3P17980 AC073592.5-201ENST00000624854 528 ntBASIC18.27■□□□□ 0.52
PSMC3P17980 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
PSMC3P17980 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
PSMC3P17980 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PSMC3P17980 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
PSMC3P17980 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC18.27■□□□□ 0.51
PSMC3P17980 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC18.27■□□□□ 0.51
PSMC3P17980 KRT8P47-201ENST00000604727 1398 ntBASIC18.27■□□□□ 0.51
PSMC3P17980 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
PSMC3P17980 AC093010.1-201ENST00000473625 1624 ntBASIC18.27■□□□□ 0.51
PSMC3P17980 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PSMC3P17980 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
PSMC3P17980 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
PSMC3P17980 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PSMC3P17980 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PSMC3P17980 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18.26■□□□□ 0.51
PSMC3P17980 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PSMC3P17980 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
PSMC3P17980 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PSMC3P17980 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PSMC3P17980 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PSMC3P17980 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
PSMC3P17980 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
PSMC3P17980 COX5BP2-201ENST00000392354 334 ntBASIC18.26■□□□□ 0.51
PSMC3P17980 NKTR-203ENST00000442970 646 ntTSL 2 BASIC18.26■□□□□ 0.51
PSMC3P17980 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PSMC3P17980 AC134684.3-201ENST00000641758 218 ntBASIC18.26■□□□□ 0.51
PSMC3P17980 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
PSMC3P17980 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PSMC3P17980 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PSMC3P17980 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
PSMC3P17980 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
PSMC3P17980 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PSMC3P17980 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
PSMC3P17980 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC18.26■□□□□ 0.51
PSMC3P17980 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
PSMC3P17980 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PSMC3P17980 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
PSMC3P17980 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PSMC3P17980 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC18.25■□□□□ 0.51
PSMC3P17980 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
PSMC3P17980 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
PSMC3P17980 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
PSMC3P17980 AC126763.1-201ENST00000552015 2118 ntBASIC18.25■□□□□ 0.51
PSMC3P17980 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
PSMC3P17980 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
PSMC3P17980 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PSMC3P17980 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
PSMC3P17980 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PSMC3P17980 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
PSMC3P17980 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PSMC3P17980 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
PSMC3P17980 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
PSMC3P17980 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PSMC3P17980 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PSMC3P17980 METTL26-205ENST00000397666 726 ntTSL 2 BASIC18.25■□□□□ 0.51
PSMC3P17980 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC18.25■□□□□ 0.51
PSMC3P17980 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC18.25■□□□□ 0.51
PSMC3P17980 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC18.25■□□□□ 0.51
PSMC3P17980 AL020989.1-201ENST00000422979 469 ntBASIC18.25■□□□□ 0.51
PSMC3P17980 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms