Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
UPK1BO75841 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
UPK1BO75841 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
UPK1BO75841 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC15.28■□□□□ 0.04
UPK1BO75841 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC15.28■□□□□ 0.04
UPK1BO75841 MTHFR-217ENST00000641820 1569 ntBASIC15.28■□□□□ 0.04
UPK1BO75841 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
UPK1BO75841 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC15.28■□□□□ 0.04
UPK1BO75841 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
UPK1BO75841 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
UPK1BO75841 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
UPK1BO75841 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
UPK1BO75841 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC15.28■□□□□ 0.04
UPK1BO75841 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
UPK1BO75841 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
UPK1BO75841 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
UPK1BO75841 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
UPK1BO75841 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
UPK1BO75841 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
UPK1BO75841 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
UPK1BO75841 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC15.28■□□□□ 0.04
UPK1BO75841 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC15.28■□□□□ 0.04
UPK1BO75841 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC15.28■□□□□ 0.04
UPK1BO75841 DUX4L16-201ENST00000555130 1264 ntBASIC15.28■□□□□ 0.04
UPK1BO75841 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC15.28■□□□□ 0.04
UPK1BO75841 RAB43-208ENST00000615093 783 ntTSL 5 BASIC15.28■□□□□ 0.04
UPK1BO75841 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
UPK1BO75841 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
UPK1BO75841 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
UPK1BO75841 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC15.28■□□□□ 0.04
UPK1BO75841 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
UPK1BO75841 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
UPK1BO75841 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC15.28■□□□□ 0.04
UPK1BO75841 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
UPK1BO75841 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
UPK1BO75841 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
UPK1BO75841 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC15.28■□□□□ 0.04
UPK1BO75841 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC15.28■□□□□ 0.04
UPK1BO75841 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
UPK1BO75841 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
UPK1BO75841 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
UPK1BO75841 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
UPK1BO75841 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
UPK1BO75841 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
UPK1BO75841 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC15.27■□□□□ 0.04
UPK1BO75841 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC15.27■□□□□ 0.04
UPK1BO75841 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
UPK1BO75841 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
UPK1BO75841 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
UPK1BO75841 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
UPK1BO75841 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
UPK1BO75841 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
UPK1BO75841 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
UPK1BO75841 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC15.27■□□□□ 0.04
UPK1BO75841 AC022532.1-201ENST00000624563 1728 ntBASIC15.27■□□□□ 0.04
UPK1BO75841 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
UPK1BO75841 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
UPK1BO75841 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
UPK1BO75841 AC093787.1-201ENST00000450396 207 ntBASIC15.27■□□□□ 0.04
UPK1BO75841 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC15.27■□□□□ 0.04
UPK1BO75841 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC15.27■□□□□ 0.04
UPK1BO75841 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC15.27■□□□□ 0.04
UPK1BO75841 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
UPK1BO75841 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
UPK1BO75841 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
UPK1BO75841 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
UPK1BO75841 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC15.27■□□□□ 0.03
UPK1BO75841 HLA-DQB2-231ENST00000435145 2026 ntBASIC15.27■□□□□ 0.03
UPK1BO75841 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
UPK1BO75841 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC15.27■□□□□ 0.03
UPK1BO75841 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC15.27■□□□□ 0.03
UPK1BO75841 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
UPK1BO75841 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
UPK1BO75841 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.03
UPK1BO75841 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC15.27■□□□□ 0.03
UPK1BO75841 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC15.27■□□□□ 0.03
UPK1BO75841 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
UPK1BO75841 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
UPK1BO75841 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
UPK1BO75841 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
UPK1BO75841 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
UPK1BO75841 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
UPK1BO75841 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
UPK1BO75841 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
UPK1BO75841 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC15.26■□□□□ 0.03
UPK1BO75841 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
UPK1BO75841 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC15.26■□□□□ 0.03
UPK1BO75841 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
UPK1BO75841 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC15.26■□□□□ 0.03
UPK1BO75841 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC15.26■□□□□ 0.03
UPK1BO75841 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
UPK1BO75841 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
UPK1BO75841 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
UPK1BO75841 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
UPK1BO75841 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
UPK1BO75841 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
UPK1BO75841 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
UPK1BO75841 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC15.26■□□□□ 0.03
UPK1BO75841 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
UPK1BO75841 APTR-203ENST00000430801 583 ntTSL 5 BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms