Protein–RNA interactions for Protein: O75400

PRPF40A, Pre-mRNA-processing factor 40 homolog A, humanhuman

Known RBP Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40AO75400 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PRPF40AO75400 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PRPF40AO75400 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PRPF40AO75400 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
PRPF40AO75400 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
PRPF40AO75400 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
PRPF40AO75400 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
PRPF40AO75400 AC016396.2-201ENST00000562575 1417 ntBASIC20.43■□□□□ 0.86
PRPF40AO75400 RHBDF1P1-201ENST00000427504 1941 ntBASIC20.43■□□□□ 0.86
PRPF40AO75400 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC20.43■□□□□ 0.86
PRPF40AO75400 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC20.43■□□□□ 0.86
PRPF40AO75400 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PRPF40AO75400 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC20.43■□□□□ 0.86
PRPF40AO75400 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PRPF40AO75400 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC20.42■□□□□ 0.86
PRPF40AO75400 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PRPF40AO75400 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
PRPF40AO75400 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PRPF40AO75400 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PRPF40AO75400 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PRPF40AO75400 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PRPF40AO75400 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PRPF40AO75400 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PRPF40AO75400 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC20.42■□□□□ 0.86
PRPF40AO75400 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC20.42■□□□□ 0.86
PRPF40AO75400 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC20.42■□□□□ 0.86
PRPF40AO75400 DDX43P3-201ENST00000441064 443 ntBASIC20.42■□□□□ 0.86
PRPF40AO75400 SEC1P-202ENST00000473944 940 ntBASIC20.42■□□□□ 0.86
PRPF40AO75400 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC20.42■□□□□ 0.86
PRPF40AO75400 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC20.42■□□□□ 0.86
PRPF40AO75400 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC20.42■□□□□ 0.86
PRPF40AO75400 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
PRPF40AO75400 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PRPF40AO75400 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
PRPF40AO75400 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC20.42■□□□□ 0.86
PRPF40AO75400 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PRPF40AO75400 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
PRPF40AO75400 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PRPF40AO75400 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC20.42■□□□□ 0.86
PRPF40AO75400 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PRPF40AO75400 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PRPF40AO75400 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PRPF40AO75400 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC20.41■□□□□ 0.86
PRPF40AO75400 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PRPF40AO75400 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PRPF40AO75400 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
PRPF40AO75400 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PRPF40AO75400 AC007663.1-201ENST00000438948 1240 ntBASIC20.41■□□□□ 0.86
PRPF40AO75400 PHB2-202ENST00000440277 996 ntTSL 5 BASIC20.41■□□□□ 0.86
PRPF40AO75400 AC005363.2-201ENST00000618631 242 ntBASIC20.41■□□□□ 0.86
PRPF40AO75400 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
PRPF40AO75400 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PRPF40AO75400 KRT18P22-201ENST00000402024 1347 ntBASIC20.41■□□□□ 0.86
PRPF40AO75400 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
PRPF40AO75400 KRT8P47-201ENST00000604727 1398 ntBASIC20.41■□□□□ 0.86
PRPF40AO75400 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC20.41■□□□□ 0.86
PRPF40AO75400 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PRPF40AO75400 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
PRPF40AO75400 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
PRPF40AO75400 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PRPF40AO75400 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PRPF40AO75400 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PRPF40AO75400 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC20.41■□□□□ 0.86
PRPF40AO75400 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PRPF40AO75400 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC20.41■□□□□ 0.86
PRPF40AO75400 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PRPF40AO75400 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC20.41■□□□□ 0.86
PRPF40AO75400 WT1-209ENST00000530998 2421 ntTSL 2 BASIC20.41■□□□□ 0.86
PRPF40AO75400 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PRPF40AO75400 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PRPF40AO75400 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC20.4■□□□□ 0.86
PRPF40AO75400 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PRPF40AO75400 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PRPF40AO75400 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PRPF40AO75400 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PRPF40AO75400 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC20.4■□□□□ 0.86
PRPF40AO75400 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PRPF40AO75400 RCN1P1-201ENST00000400413 996 ntBASIC20.4■□□□□ 0.86
PRPF40AO75400 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
PRPF40AO75400 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
PRPF40AO75400 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
PRPF40AO75400 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PRPF40AO75400 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC20.4■□□□□ 0.86
PRPF40AO75400 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC20.4■□□□□ 0.86
PRPF40AO75400 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PRPF40AO75400 DUT-205ENST00000558813 769 ntTSL 2 BASIC20.4■□□□□ 0.86
PRPF40AO75400 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC20.4■□□□□ 0.86
PRPF40AO75400 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PRPF40AO75400 MED29-202ENST00000594368 1471 ntTSL 2 BASIC20.4■□□□□ 0.86
PRPF40AO75400 AC024243.1-201ENST00000609234 778 ntBASIC20.4■□□□□ 0.86
PRPF40AO75400 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC20.4■□□□□ 0.86
PRPF40AO75400 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC20.4■□□□□ 0.86
PRPF40AO75400 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
PRPF40AO75400 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PRPF40AO75400 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
PRPF40AO75400 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC20.39■□□□□ 0.86
PRPF40AO75400 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC20.39■□□□□ 0.86
PRPF40AO75400 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
PRPF40AO75400 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC20.39■□□□□ 0.86
PRPF40AO75400 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms