Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC16.85■□□□□ 0.29
CPNE3O75131 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CPNE3O75131 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CPNE3O75131 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CPNE3O75131 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
CPNE3O75131 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC16.85■□□□□ 0.29
CPNE3O75131 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CPNE3O75131 EFTUD1P1-204ENST00000560401 1798 ntBASIC16.84■□□□□ 0.29
CPNE3O75131 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC16.84■□□□□ 0.29
CPNE3O75131 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
CPNE3O75131 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CPNE3O75131 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CPNE3O75131 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CPNE3O75131 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CPNE3O75131 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CPNE3O75131 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CPNE3O75131 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC16.84■□□□□ 0.29
CPNE3O75131 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CPNE3O75131 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
CPNE3O75131 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
CPNE3O75131 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CPNE3O75131 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC16.84■□□□□ 0.29
CPNE3O75131 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CPNE3O75131 PMS2P1-201ENST00000431037 1228 ntBASIC16.84■□□□□ 0.29
CPNE3O75131 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CPNE3O75131 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC16.84■□□□□ 0.29
CPNE3O75131 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CPNE3O75131 AC021087.4-201ENST00000563761 564 ntBASIC16.84■□□□□ 0.29
CPNE3O75131 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC16.84■□□□□ 0.29
CPNE3O75131 NME4-212ENST00000621774 904 ntTSL 3 BASIC16.84■□□□□ 0.29
CPNE3O75131 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC16.84■□□□□ 0.29
CPNE3O75131 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CPNE3O75131 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC16.84■□□□□ 0.29
CPNE3O75131 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.84■□□□□ 0.29
CPNE3O75131 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CPNE3O75131 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC16.84■□□□□ 0.29
CPNE3O75131 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC16.84■□□□□ 0.29
CPNE3O75131 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CPNE3O75131 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CPNE3O75131 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CPNE3O75131 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
CPNE3O75131 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CPNE3O75131 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC16.84■□□□□ 0.29
CPNE3O75131 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CPNE3O75131 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CPNE3O75131 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CPNE3O75131 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
CPNE3O75131 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CPNE3O75131 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
CPNE3O75131 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.83■□□□□ 0.29
CPNE3O75131 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.29
CPNE3O75131 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CPNE3O75131 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CPNE3O75131 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CPNE3O75131 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CPNE3O75131 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CPNE3O75131 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CPNE3O75131 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
CPNE3O75131 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
CPNE3O75131 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
CPNE3O75131 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
CPNE3O75131 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC16.83■□□□□ 0.28
CPNE3O75131 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
CPNE3O75131 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CPNE3O75131 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC16.83■□□□□ 0.28
CPNE3O75131 RAB17-203ENST00000409576 466 ntTSL 3 BASIC16.83■□□□□ 0.28
CPNE3O75131 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC16.83■□□□□ 0.28
CPNE3O75131 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CPNE3O75131 AC243591.1-201ENST00000452967 1364 ntBASIC16.83■□□□□ 0.28
CPNE3O75131 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
CPNE3O75131 AC122714.2-201ENST00000502787 707 ntBASIC16.83■□□□□ 0.28
CPNE3O75131 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC16.83■□□□□ 0.28
CPNE3O75131 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC16.83■□□□□ 0.28
CPNE3O75131 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC16.83■□□□□ 0.28
CPNE3O75131 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC16.83■□□□□ 0.28
CPNE3O75131 LITAF-211ENST00000572255 516 ntTSL 4 BASIC16.83■□□□□ 0.28
CPNE3O75131 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
CPNE3O75131 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
CPNE3O75131 KRT8P47-201ENST00000604727 1398 ntBASIC16.83■□□□□ 0.28
CPNE3O75131 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CPNE3O75131 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CPNE3O75131 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC16.83■□□□□ 0.28
CPNE3O75131 AF228730.7-201ENST00000641842 219 ntBASIC16.83■□□□□ 0.28
CPNE3O75131 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
CPNE3O75131 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
CPNE3O75131 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CPNE3O75131 EML3-216ENST00000529309 2909 ntTSL 2 BASIC16.83■□□□□ 0.28
CPNE3O75131 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CPNE3O75131 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CPNE3O75131 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CPNE3O75131 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CPNE3O75131 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC16.82■□□□□ 0.28
CPNE3O75131 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
CPNE3O75131 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC16.82■□□□□ 0.28
CPNE3O75131 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CPNE3O75131 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CPNE3O75131 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CPNE3O75131 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
CPNE3O75131 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CPNE3O75131 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 68.7 ms