Protein–RNA interactions for Protein: O15164

TRIM24, Transcription intermediary factor 1-alpha, humanhuman

Predictions only

Length 1,050 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM24O15164 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRIM24O15164 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TRIM24O15164 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRIM24O15164 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRIM24O15164 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRIM24O15164 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRIM24O15164 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRIM24O15164 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TRIM24O15164 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRIM24O15164 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
TRIM24O15164 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
TRIM24O15164 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC18.07■□□□□ 0.48
TRIM24O15164 RPP21-221ENST00000428040 594 ntTSL 2 BASIC18.07■□□□□ 0.48
TRIM24O15164 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRIM24O15164 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC18.07■□□□□ 0.48
TRIM24O15164 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TRIM24O15164 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRIM24O15164 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC18.07■□□□□ 0.48
TRIM24O15164 AC034105.1-201ENST00000563488 319 ntBASIC18.07■□□□□ 0.48
TRIM24O15164 TERC-201ENST00000602385 541 ntBASIC18.07■□□□□ 0.48
TRIM24O15164 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC18.07■□□□□ 0.48
TRIM24O15164 AC073592.5-201ENST00000624854 528 ntBASIC18.07■□□□□ 0.48
TRIM24O15164 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC18.07■□□□□ 0.48
TRIM24O15164 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC18.07■□□□□ 0.48
TRIM24O15164 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TRIM24O15164 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TRIM24O15164 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRIM24O15164 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC18.07■□□□□ 0.48
TRIM24O15164 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TRIM24O15164 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRIM24O15164 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC18.07■□□□□ 0.48
TRIM24O15164 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRIM24O15164 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TRIM24O15164 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TRIM24O15164 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRIM24O15164 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC18.07■□□□□ 0.48
TRIM24O15164 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
TRIM24O15164 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRIM24O15164 ZNF259P1-201ENST00000407656 1365 ntBASIC18.06■□□□□ 0.48
TRIM24O15164 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRIM24O15164 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRIM24O15164 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRIM24O15164 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRIM24O15164 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.06■□□□□ 0.48
TRIM24O15164 AL049757.1-201ENST00000616842 1596 ntBASIC18.06■□□□□ 0.48
TRIM24O15164 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
TRIM24O15164 AC105339.3-201ENST00000560043 636 ntBASIC18.06■□□□□ 0.48
TRIM24O15164 AC145285.3-201ENST00000564603 959 ntBASIC18.06■□□□□ 0.48
TRIM24O15164 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TRIM24O15164 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TRIM24O15164 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
TRIM24O15164 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRIM24O15164 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TRIM24O15164 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRIM24O15164 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TRIM24O15164 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC18.06■□□□□ 0.48
TRIM24O15164 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.06■□□□□ 0.48
TRIM24O15164 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRIM24O15164 MED29-202ENST00000594368 1471 ntTSL 2 BASIC18.06■□□□□ 0.48
TRIM24O15164 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRIM24O15164 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRIM24O15164 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC18.06■□□□□ 0.48
TRIM24O15164 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM24O15164 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM24O15164 AC148477.5-201ENST00000625164 1645 ntBASIC18.05■□□□□ 0.48
TRIM24O15164 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC18.05■□□□□ 0.48
TRIM24O15164 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM24O15164 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.05■□□□□ 0.48
TRIM24O15164 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC18.05■□□□□ 0.48
TRIM24O15164 AC132938.5-201ENST00000624980 1813 ntBASIC18.05■□□□□ 0.48
TRIM24O15164 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC18.05■□□□□ 0.48
TRIM24O15164 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM24O15164 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC18.05■□□□□ 0.48
TRIM24O15164 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM24O15164 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM24O15164 BCL2-203ENST00000589955 5011 ntBASIC18.05■□□□□ 0.48
TRIM24O15164 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM24O15164 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC18.05■□□□□ 0.48
TRIM24O15164 SPDYE21P-201ENST00000413323 827 ntBASIC18.05■□□□□ 0.48
TRIM24O15164 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC18.05■□□□□ 0.48
TRIM24O15164 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC18.05■□□□□ 0.48
TRIM24O15164 SDCCAG3P1-201ENST00000589292 1150 ntBASIC18.05■□□□□ 0.48
TRIM24O15164 TMED1-207ENST00000591695 809 ntTSL 5 BASIC18.05■□□□□ 0.48
TRIM24O15164 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC18.05■□□□□ 0.48
TRIM24O15164 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC18.05■□□□□ 0.48
TRIM24O15164 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC18.05■□□□□ 0.48
TRIM24O15164 AC073592.4-201ENST00000623827 446 ntBASIC18.05■□□□□ 0.48
TRIM24O15164 AC117500.6-201ENST00000624871 588 ntBASIC18.05■□□□□ 0.48
TRIM24O15164 AL022326.1-202ENST00000641533 845 ntBASIC18.05■□□□□ 0.48
TRIM24O15164 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC18.05■□□□□ 0.48
TRIM24O15164 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC18.05■□□□□ 0.48
TRIM24O15164 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM24O15164 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM24O15164 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM24O15164 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM24O15164 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM24O15164 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM24O15164 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
TRIM24O15164 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM24O15164 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms