Protein–RNA interactions for Protein: A6NMK7

CPSF4L, Putative cleavage and polyadenylation specificity factor subunit 4-like protein, humanhuman

Known RBP Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4LA6NMK7 MTCL1P1-201ENST00000446207 792 ntBASIC16.21■□□□□ 0.19
CPSF4LA6NMK7 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC16.21■□□□□ 0.19
CPSF4LA6NMK7 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC16.21■□□□□ 0.19
CPSF4LA6NMK7 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC16.21■□□□□ 0.19
CPSF4LA6NMK7 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CPSF4LA6NMK7 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CPSF4LA6NMK7 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CPSF4LA6NMK7 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC16.21■□□□□ 0.19
CPSF4LA6NMK7 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CPSF4LA6NMK7 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CPSF4LA6NMK7 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC16.21■□□□□ 0.19
CPSF4LA6NMK7 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CPSF4LA6NMK7 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC16.21■□□□□ 0.19
CPSF4LA6NMK7 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
CPSF4LA6NMK7 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.19
CPSF4LA6NMK7 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CPSF4LA6NMK7 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CPSF4LA6NMK7 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC16.21■□□□□ 0.19
CPSF4LA6NMK7 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CPSF4LA6NMK7 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CPSF4LA6NMK7 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
CPSF4LA6NMK7 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CPSF4LA6NMK7 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CPSF4LA6NMK7 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC16.21■□□□□ 0.18
CPSF4LA6NMK7 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CPSF4LA6NMK7 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC16.21■□□□□ 0.18
CPSF4LA6NMK7 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
CPSF4LA6NMK7 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CPSF4LA6NMK7 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CPSF4LA6NMK7 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC16.2■□□□□ 0.18
CPSF4LA6NMK7 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC16.2■□□□□ 0.18
CPSF4LA6NMK7 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC16.2■□□□□ 0.18
CPSF4LA6NMK7 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CPSF4LA6NMK7 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC16.2■□□□□ 0.18
CPSF4LA6NMK7 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CPSF4LA6NMK7 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CPSF4LA6NMK7 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CPSF4LA6NMK7 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
CPSF4LA6NMK7 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CPSF4LA6NMK7 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
CPSF4LA6NMK7 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CPSF4LA6NMK7 AK4P3-201ENST00000418260 669 ntBASIC16.2■□□□□ 0.18
CPSF4LA6NMK7 HOMER2P1-201ENST00000455653 964 ntBASIC16.2■□□□□ 0.18
CPSF4LA6NMK7 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC16.2■□□□□ 0.18
CPSF4LA6NMK7 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC16.2■□□□□ 0.18
CPSF4LA6NMK7 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC16.2■□□□□ 0.18
CPSF4LA6NMK7 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CPSF4LA6NMK7 AC006011.2-201ENST00000621313 1158 ntBASIC16.2■□□□□ 0.18
CPSF4LA6NMK7 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CPSF4LA6NMK7 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
CPSF4LA6NMK7 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC16.2■□□□□ 0.18
CPSF4LA6NMK7 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC16.2■□□□□ 0.18
CPSF4LA6NMK7 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CPSF4LA6NMK7 NFIC-211ENST00000641145 8399 ntBASIC16.2■□□□□ 0.18
CPSF4LA6NMK7 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
CPSF4LA6NMK7 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.2■□□□□ 0.18
CPSF4LA6NMK7 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CPSF4LA6NMK7 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
CPSF4LA6NMK7 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CPSF4LA6NMK7 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.2■□□□□ 0.18
CPSF4LA6NMK7 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
CPSF4LA6NMK7 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CPSF4LA6NMK7 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.2■□□□□ 0.18
CPSF4LA6NMK7 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
CPSF4LA6NMK7 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CPSF4LA6NMK7 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CPSF4LA6NMK7 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CPSF4LA6NMK7 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
CPSF4LA6NMK7 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CPSF4LA6NMK7 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
CPSF4LA6NMK7 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CPSF4LA6NMK7 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CPSF4LA6NMK7 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CPSF4LA6NMK7 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CPSF4LA6NMK7 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC16.19■□□□□ 0.18
CPSF4LA6NMK7 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC16.19■□□□□ 0.18
CPSF4LA6NMK7 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CPSF4LA6NMK7 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
CPSF4LA6NMK7 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CPSF4LA6NMK7 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CPSF4LA6NMK7 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
CPSF4LA6NMK7 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CPSF4LA6NMK7 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC16.19■□□□□ 0.18
CPSF4LA6NMK7 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CPSF4LA6NMK7 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
CPSF4LA6NMK7 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CPSF4LA6NMK7 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CPSF4LA6NMK7 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC16.19■□□□□ 0.18
CPSF4LA6NMK7 AC092647.4-201ENST00000457211 535 ntBASIC16.19■□□□□ 0.18
CPSF4LA6NMK7 AC068472.1-201ENST00000474589 881 ntBASIC16.19■□□□□ 0.18
CPSF4LA6NMK7 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC16.19■□□□□ 0.18
CPSF4LA6NMK7 AC005332.3-201ENST00000589904 676 ntBASIC16.19■□□□□ 0.18
CPSF4LA6NMK7 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CPSF4LA6NMK7 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC16.19■□□□□ 0.18
CPSF4LA6NMK7 ANKRD20A8P-203ENST00000641373 517 ntBASIC16.19■□□□□ 0.18
CPSF4LA6NMK7 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CPSF4LA6NMK7 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CPSF4LA6NMK7 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
CPSF4LA6NMK7 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC16.19■□□□□ 0.18
CPSF4LA6NMK7 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms