Protein–RNA interactions for Protein: A6H8M9

CDHR4, Cadherin-related family member 4, humanhuman

Predictions only

Length 788 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR4A6H8M9 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.13■□□□□ 0.17
CDHR4A6H8M9 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC16.13■□□□□ 0.17
CDHR4A6H8M9 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
CDHR4A6H8M9 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDHR4A6H8M9 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDHR4A6H8M9 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
CDHR4A6H8M9 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDHR4A6H8M9 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDHR4A6H8M9 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC16.12■□□□□ 0.17
CDHR4A6H8M9 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDHR4A6H8M9 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDHR4A6H8M9 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDHR4A6H8M9 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CDHR4A6H8M9 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CDHR4A6H8M9 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CDHR4A6H8M9 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDHR4A6H8M9 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC16.12■□□□□ 0.17
CDHR4A6H8M9 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDHR4A6H8M9 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDHR4A6H8M9 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDHR4A6H8M9 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CDHR4A6H8M9 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC16.12■□□□□ 0.17
CDHR4A6H8M9 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDHR4A6H8M9 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CDHR4A6H8M9 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.12■□□□□ 0.17
CDHR4A6H8M9 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC16.12■□□□□ 0.17
CDHR4A6H8M9 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDHR4A6H8M9 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDHR4A6H8M9 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDHR4A6H8M9 MYCLP1-201ENST00000372451 1075 ntBASIC16.12■□□□□ 0.17
CDHR4A6H8M9 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC16.12■□□□□ 0.17
CDHR4A6H8M9 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC16.12■□□□□ 0.17
CDHR4A6H8M9 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC16.12■□□□□ 0.17
CDHR4A6H8M9 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC16.12■□□□□ 0.17
CDHR4A6H8M9 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC16.12■□□□□ 0.17
CDHR4A6H8M9 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDHR4A6H8M9 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
CDHR4A6H8M9 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC16.12■□□□□ 0.17
CDHR4A6H8M9 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC16.12■□□□□ 0.17
CDHR4A6H8M9 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC16.12■□□□□ 0.17
CDHR4A6H8M9 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC16.12■□□□□ 0.17
CDHR4A6H8M9 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC16.12■□□□□ 0.17
CDHR4A6H8M9 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC16.12■□□□□ 0.17
CDHR4A6H8M9 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDHR4A6H8M9 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
CDHR4A6H8M9 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDHR4A6H8M9 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CDHR4A6H8M9 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDHR4A6H8M9 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC16.12■□□□□ 0.17
CDHR4A6H8M9 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC16.12■□□□□ 0.17
CDHR4A6H8M9 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC16.12■□□□□ 0.17
CDHR4A6H8M9 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CDHR4A6H8M9 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC16.12■□□□□ 0.17
CDHR4A6H8M9 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDHR4A6H8M9 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC16.12■□□□□ 0.17
CDHR4A6H8M9 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDHR4A6H8M9 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
CDHR4A6H8M9 AC016734.2-201ENST00000624325 1377 ntBASIC16.12■□□□□ 0.17
CDHR4A6H8M9 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
CDHR4A6H8M9 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC16.11■□□□□ 0.17
CDHR4A6H8M9 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDHR4A6H8M9 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CDHR4A6H8M9 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC16.11■□□□□ 0.17
CDHR4A6H8M9 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDHR4A6H8M9 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDHR4A6H8M9 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CDHR4A6H8M9 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDHR4A6H8M9 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CDHR4A6H8M9 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDHR4A6H8M9 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDHR4A6H8M9 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CDHR4A6H8M9 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDHR4A6H8M9 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CDHR4A6H8M9 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDHR4A6H8M9 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC16.11■□□□□ 0.17
CDHR4A6H8M9 MEG3-211ENST00000452514 461 ntTSL 3 BASIC16.11■□□□□ 0.17
CDHR4A6H8M9 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC16.11■□□□□ 0.17
CDHR4A6H8M9 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDHR4A6H8M9 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDHR4A6H8M9 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC16.11■□□□□ 0.17
CDHR4A6H8M9 TK1-204ENST00000590430 683 ntTSL 3 BASIC16.11■□□□□ 0.17
CDHR4A6H8M9 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
CDHR4A6H8M9 AL590326.2-201ENST00000625139 305 ntBASIC16.11■□□□□ 0.17
CDHR4A6H8M9 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDHR4A6H8M9 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDHR4A6H8M9 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDHR4A6H8M9 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
CDHR4A6H8M9 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDHR4A6H8M9 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CDHR4A6H8M9 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
CDHR4A6H8M9 AC116353.5-201ENST00000638148 1699 ntBASIC16.11■□□□□ 0.17
CDHR4A6H8M9 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
CDHR4A6H8M9 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDHR4A6H8M9 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDHR4A6H8M9 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CDHR4A6H8M9 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDHR4A6H8M9 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC16.1■□□□□ 0.17
CDHR4A6H8M9 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CDHR4A6H8M9 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC16.1■□□□□ 0.17
CDHR4A6H8M9 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms