Protein–RNA interactions for Protein: A0A1B0GVG4

CCDC194, Coiled-coil domain-containing protein 194, humanhuman

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC194A0A1B0GVG4 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC194A0A1B0GVG4 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC194A0A1B0GVG4 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
CCDC194A0A1B0GVG4 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC194A0A1B0GVG4 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC194A0A1B0GVG4 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC194A0A1B0GVG4 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC194A0A1B0GVG4 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC194A0A1B0GVG4 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC20.05■□□□□ 0.8
CCDC194A0A1B0GVG4 TSPY19P-201ENST00000418461 509 ntBASIC20.05■□□□□ 0.8
CCDC194A0A1B0GVG4 TSPY18P-201ENST00000441642 509 ntBASIC20.05■□□□□ 0.8
CCDC194A0A1B0GVG4 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC20.05■□□□□ 0.8
CCDC194A0A1B0GVG4 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC20.05■□□□□ 0.8
CCDC194A0A1B0GVG4 NKTR-203ENST00000442970 646 ntTSL 2 BASIC20.05■□□□□ 0.8
CCDC194A0A1B0GVG4 AC091304.2-201ENST00000564639 760 ntBASIC20.05■□□□□ 0.8
CCDC194A0A1B0GVG4 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC20.05■□□□□ 0.8
CCDC194A0A1B0GVG4 AL732292.2-201ENST00000609649 430 ntBASIC20.05■□□□□ 0.8
CCDC194A0A1B0GVG4 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC20.05■□□□□ 0.8
CCDC194A0A1B0GVG4 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC194A0A1B0GVG4 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC20.05■□□□□ 0.8
CCDC194A0A1B0GVG4 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
CCDC194A0A1B0GVG4 FUT8-AS1-201ENST00000621019 1521 ntBASIC20.05■□□□□ 0.8
CCDC194A0A1B0GVG4 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC194A0A1B0GVG4 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC194A0A1B0GVG4 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC194A0A1B0GVG4 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC194A0A1B0GVG4 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC194A0A1B0GVG4 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC20.05■□□□□ 0.8
CCDC194A0A1B0GVG4 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC194A0A1B0GVG4 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC194A0A1B0GVG4 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC194A0A1B0GVG4 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC194A0A1B0GVG4 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC194A0A1B0GVG4 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC194A0A1B0GVG4 AC026471.1-201ENST00000564629 3026 ntBASIC20.05■□□□□ 0.8
CCDC194A0A1B0GVG4 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
CCDC194A0A1B0GVG4 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC20.05■□□□□ 0.8
CCDC194A0A1B0GVG4 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
CCDC194A0A1B0GVG4 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC194A0A1B0GVG4 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC20.04■□□□□ 0.8
CCDC194A0A1B0GVG4 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC20.04■□□□□ 0.8
CCDC194A0A1B0GVG4 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC194A0A1B0GVG4 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC194A0A1B0GVG4 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC194A0A1B0GVG4 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC194A0A1B0GVG4 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC194A0A1B0GVG4 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC194A0A1B0GVG4 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC194A0A1B0GVG4 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC20.04■□□□□ 0.8
CCDC194A0A1B0GVG4 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC194A0A1B0GVG4 SRP19-202ENST00000445150 833 ntTSL 2 BASIC20.04■□□□□ 0.8
CCDC194A0A1B0GVG4 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC20.04■□□□□ 0.8
CCDC194A0A1B0GVG4 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC20.04■□□□□ 0.8
CCDC194A0A1B0GVG4 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
CCDC194A0A1B0GVG4 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
CCDC194A0A1B0GVG4 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC194A0A1B0GVG4 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC194A0A1B0GVG4 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC194A0A1B0GVG4 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC194A0A1B0GVG4 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC194A0A1B0GVG4 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC194A0A1B0GVG4 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC20.04■□□□□ 0.8
CCDC194A0A1B0GVG4 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC194A0A1B0GVG4 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC194A0A1B0GVG4 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
CCDC194A0A1B0GVG4 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC194A0A1B0GVG4 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC194A0A1B0GVG4 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC194A0A1B0GVG4 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC20.03■□□□□ 0.8
CCDC194A0A1B0GVG4 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC20.03■□□□□ 0.8
CCDC194A0A1B0GVG4 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC194A0A1B0GVG4 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC194A0A1B0GVG4 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC194A0A1B0GVG4 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC194A0A1B0GVG4 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC194A0A1B0GVG4 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC194A0A1B0GVG4 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC194A0A1B0GVG4 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC194A0A1B0GVG4 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
CCDC194A0A1B0GVG4 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC20.03■□□□□ 0.8
CCDC194A0A1B0GVG4 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC20.03■□□□□ 0.8
CCDC194A0A1B0GVG4 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC20.03■□□□□ 0.8
CCDC194A0A1B0GVG4 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC194A0A1B0GVG4 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC20.03■□□□□ 0.8
CCDC194A0A1B0GVG4 ABCD1P5-201ENST00000445663 754 ntBASIC20.03■□□□□ 0.8
CCDC194A0A1B0GVG4 AC132008.2-207ENST00000454517 770 ntBASIC20.03■□□□□ 0.8
CCDC194A0A1B0GVG4 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC20.03■□□□□ 0.8
CCDC194A0A1B0GVG4 SDHD-206ENST00000528182 754 ntTSL 3 BASIC20.03■□□□□ 0.8
CCDC194A0A1B0GVG4 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC20.03■□□□□ 0.8
CCDC194A0A1B0GVG4 TPM1-218ENST00000559281 851 ntTSL 5 BASIC20.03■□□□□ 0.8
CCDC194A0A1B0GVG4 STK25P1-201ENST00000585406 838 ntBASIC20.03■□□□□ 0.8
CCDC194A0A1B0GVG4 AC073592.5-201ENST00000624854 528 ntBASIC20.03■□□□□ 0.8
CCDC194A0A1B0GVG4 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC20.03■□□□□ 0.8
CCDC194A0A1B0GVG4 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC20.03■□□□□ 0.8
CCDC194A0A1B0GVG4 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC194A0A1B0GVG4 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC194A0A1B0GVG4 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC194A0A1B0GVG4 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC194A0A1B0GVG4 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC194A0A1B0GVG4 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms